RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ADH6P28332 368 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 CPOXP36551 454 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 CCT3P49368 545 aaKnown RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF41P51814 821 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 C21orf58P58505 322 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FAM27E3Q08E93 113 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 GUSBP1Q15486 140 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 GTF2IRD2BQ6EKJ0 949 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 VWA1Q6PCB0 445 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FIGNL1Q6PIW4 674 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF474Q6S9Z5 364 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ESPNLQ6ZVH7 1005 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 GTF2IRD2Q86UP8 949 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 GGNQ86UU5 652 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF527Q8NB42 609 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 OR5M1Q8NGP8 315 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 C16orf58Q96GQ5 468 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ACTRT3Q9BYD9 372 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 PRRG4Q9BZD6 226 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 BHLHE41Q9C0J9 482 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 PLSCR4Q9NRQ2 329 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FGFR1OP2Q9NVK5 253 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ZDHHC2Q9UIJ5 367 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FAF1Q9UNN5 650 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 PROCRQ9UNN8 238 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 EMC9Q9Y3B6 208 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 H0YC42 278 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 EIF1AYO14602 144 aaKnown RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 PABPC4LP0CB38 370 aaKnown RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 TROVE2P10155 538 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 LAMP1P11279 417 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 POU2F1P14859 743 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 BGNP21810 368 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 UGT2B10P36537 528 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 EIF1AXP47813 144 aaKnown RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 SUMO3P55854 103 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 AKAP6Q13023 2319 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 LASP1Q14847 261 aaKnown RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 PLPPR5Q32ZL2 321 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 IL23RQ5VWK5 629 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 ZCCHC23Q6ZST2 131 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 OR7A2PQ8NGA2 310 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 B4GALNT2Q8NHY0 566 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 PPP1R14CQ8TAE6 165 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 SFXN5Q8TD22 340 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 ADAMTS15Q8TE58 950 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 STON2Q8WXE9 905 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 JADE3Q92613 823 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 GMPPAQ96IJ6 420 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 BEX4Q9NWD9 120 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-212ENST00000527887 ASIC5Q9NY37 505 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 HAO1Q9UJM8 370 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 SNX8Q9Y5X2 465 aa12.75□□□□□ -0.37
CAPN1-212ENST00000527887 KIAA1549Q9HCM3 1950 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 DUXAA6NLW8 204 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 SYNGR4O95473 234 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 PPP3CBP16298 524 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 KLK2P20151 261 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 CRYGSP22914 178 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 PSMA4P25789 261 aaKnown RBP12.74□□□□□ -0.37
CAPN1-212ENST00000527887 ELK4P28324 431 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 KCNJ5P48544 419 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 CTBP2P56545 445 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 CLDN8P56748 225 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 SIRPAP78324 504 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 EMX2Q04743 252 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 BST1Q10588 318 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 TP53BP2Q13625 1128 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 PTGR1Q14914 329 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 SPDYE7PQ495Y7 208 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 KLHL26Q53HC5 615 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 SPATA21Q7Z572 469 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 RIMKLAQ8IXN7 391 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 OR2V1Q8NHB1 315 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 AGR3Q8TD06 166 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 TUBGCP3Q96CW5 907 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 C3orf30Q96M34 536 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 MED18Q9BUE0 208 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 OPN3Q9H1Y3 402 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-212ENST00000527887 TIGARQ9NQ88 270 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
CAPN1-212ENST00000527887 KLHL14Q9P2G3 628 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 VPS13CQ709C8 3753 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 ABCA4P78363 2273 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 MED13LQ71F56 2210 aa12.74□□□□□ -0.37
CAPN1-212ENST00000527887 GJE1A6NN92 205 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms