RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 DPRXA6NFQ7 191 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 PDPK1O15530 556 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 ADAM11O75078 769 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 NDUFS7O75251 213 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 PRKD3O94806 890 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 ADAP00813 363 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 YES1P07947 543 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 LINGO3P0C6S8 592 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 ACP2P11117 423 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 SHC1P29353 583 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 SFTPDP35247 375 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 BSPH1Q075Z2 132 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 ITGADQ13349 1161 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 NUP43Q8NFH3 380 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 KBTBD8Q8NFY9 601 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 KISS1RQ969F8 398 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-210ENST00000527027 GIMAP5Q96F15 307 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 METTL2AQ96IZ6 378 aaKnown RBP14.31□□□□□ -0.12
PTPRU-210ENST00000527027 HS6ST2Q96MM7 605 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 TRIM2Q9C040 744 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 GRIP2Q9C0E4 1043 aa14.31□□□□□ -0.12
PTPRU-210ENST00000527027 BARX1Q9HBU1 254 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-210ENST00000527027 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-210ENST00000527027 CUBNO60494 3623 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 A0A1W2PQD3 144 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 A8MV72 311 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-210ENST00000527027 H3BQF6 201 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 SCDO00767 359 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 EFNA2O43921 213 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 SEC22BO75396 215 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CD8AP01732 235 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 GSTA1P08263 222 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 GCAP28676 217 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 SERPINB4P48594 390 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 PRIM2P49643 509 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 KIAA0040Q15053 153 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CD226Q15762 336 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 DUSP5Q16690 384 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CHRFAM7AQ494W8 412 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 ANKRD26P1Q6NSI1 321 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 FCRLAQ7L513 359 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 ATG4DQ86TL0 474 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-210ENST00000527027 BANPQ8N9N5 519 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 ZFP28Q8NHY6 868 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 FBXO30Q8TB52 745 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CIDECQ96AQ7 238 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CCDC126Q96EE4 140 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-210ENST00000527027 TRAF4Q9BUZ4 470 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-210ENST00000527027 SRXN1Q9BYN0 137 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 POTEKPQ9BYX7 375 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CCL27Q9Y4X3 112 aa14.3□□□□□ -0.12
PTPRU-210ENST00000527027 CADP27708 2225 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 GJE1A6NN92 205 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF814B7Z6K7 855 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF195O14628 629 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 HSPA4LO95757 839 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ALOX5P09917 674 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ELK4P28324 431 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ECHS1P30084 290 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 NAA20P61599 178 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 TMEM176BQ3YBM2 270 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ZCCHC12Q6PEW1 402 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 BHLHA15Q7RTS1 189 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-210ENST00000527027 SZRD1Q7Z422 152 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 TDRPQ86YL5 185 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 SLC43A2Q8N370 569 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ACMSDQ8TDX5 336 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 C16orf58Q96GQ5 468 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 MS4A4EQ96PG1 132 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 RHNO1Q9BSD3 238 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 ALG2Q9H553 416 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 FAIMQ9NVQ4 179 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 CISD1Q9NZ45 108 aaKnown RBP14.29□□□□□ -0.12
PTPRU-210ENST00000527027 SH3BP4Q9P0V3 963 aa14.29□□□□□ -0.12
PTPRU-210ENST00000527027 GDF2Q9UK05 429 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-210ENST00000527027 NPIPB8E9PQR5 432 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 G3V2L1 256 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 GOLGA8RI6L899 631 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 TBX19O60806 448 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 RAMP1O60894 148 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 CRCPO75575 148 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 PRPH2P23942 346 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 FRKP42685 505 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-210ENST00000527027 FOXF1Q12946 379 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF385BQ569K4 471 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 EXOSC6Q5RKV6 272 aaKnown RBP14.28□□□□□ -0.12
PTPRU-210ENST00000527027 CCNJQ5T5M9 372 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 Q6ZT83 130 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
PTPRU-210ENST00000527027 DTX2Q86UW9 622 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 COX18Q8N8Q8 333 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 FBXO27Q8NI29 283 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 BTBD2Q9BX70 525 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 REEP4Q9H6H4 257 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms