RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SSX2Q16385 188 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PDZK1Q5T2W1 519 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PRAMEF5Q5TYX0 476 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PRAMEF6Q5VXH4 476 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 KCNIP4Q6PIL6 250 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 CCDC80Q76M96 950 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 IFNEQ86WN2 208 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 ECHDC2Q86YB7 292 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 C17orf47Q8NEP4 570 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 HCAR2Q8TDS4 363 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 AENQ8WTP8 325 aaKnown RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SDSLQ96GA7 329 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 CITED1Q99966 193 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SLC17A5Q9NRA2 495 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 ABCC13Q9NSE7 274 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 RAB20Q9NX57 234 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 IL36GQ9NZH8 169 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SPATA7Q9P0W8 599 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SEC14L3Q9UDX4 400 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SUN2Q9UH99 717 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 CPQQ9Y646 472 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 EPM2AB3EWF7 344 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 CTAG2O75638 210 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 HPP00738 406 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 RNF224P0DH78 156 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SDC1P18827 310 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 CYP2B6P20813 491 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 LMO2P25791 158 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 CDH5P33151 784 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SPRP35270 261 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 OR1D4P47884 311 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 VEGFCP49767 419 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 ATP4BP51164 291 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 DUSP3P51452 185 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 RIDAP52758 137 aaKnown RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 RND3P61587 244 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 OC90Q02509 493 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF154Q13106 437 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SLC15A2Q16348 729 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SLC25A52Q3SY17 297 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 C14orf28Q4W4Y0 310 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 C14orf177Q52M58 125 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 FAM182AQ5T1J6 154 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 ARMC12Q5T9G4 340 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 PRAMEF20Q5VT98 475 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SCYL2Q6P3W7 929 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 PAQR6Q6TCH4 344 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 DHDDSQ86SQ9 333 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 CLEC4FQ8N1N0 589 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 Q8NBF4 154 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 CATSPER1Q8NEC5 780 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 BEST4Q8NFU0 473 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 OR9A4Q8NGU2 314 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 BRSK1Q8TDC3 778 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 C9orf85Q96MD7 179 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 SLC38A2Q96QD8 506 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 VCPKMTQ9H867 229 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 AMBNQ9NP70 447 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 DDX18Q9NVP1 670 aaKnown RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 ELOVL2Q9NXB9 296 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 EHFQ9NZC4 300 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 RCOR3Q9P2K3 495 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-211ENST00000525970 MGAT4AQ9UM21 535 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 IFT52Q9Y366 437 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 OARD1Q9Y530 152 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 TTC21BQ7Z4L5 1316 aa3.64□□□□□ -1.83
CSDE1-211ENST00000525970 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-211ENST00000525970 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-211ENST00000525970 PDHXO00330 501 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 IDH3BO43837 385 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 CRYGBP07316 175 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 HSD17B1P14061 328 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 PVRP15151 417 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 UGT1A4P22310 534 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 CD80P33681 288 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 KLRB1Q12918 225 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 NDUFA9Q16795 377 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 CYP51A1Q16850 503 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 BCL7AQ4VC05 210 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 TP53I3Q53FA7 332 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 VWA2Q5GFL6 755 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 C1orf220Q5T0J3 134 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 BEND3Q5T5X7 828 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 LGSNQ5TDP6 509 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 LIPNQ5VXI9 398 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 ZNF57Q68EA5 555 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-211ENST00000525970 REP15Q6BDI9 236 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 VITQ6UXI7 678 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 APTXQ7Z2E3 356 aaKnown RBP3.63□□□□□ -1.83
CSDE1-211ENST00000525970 TRIM69Q86WT6 500 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 EGFL6Q8IUX8 553 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 DHRSXQ8N5I4 330 aa3.63□□□□□ -1.83
CSDE1-211ENST00000525970 Q8N9G6 341 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-211ENST00000525970 OR51G2Q8NGK0 314 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms