RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 A0A096LNT2 108 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 IGHV1-45A0A0A0MS14 117 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NSG1A0A0A6YYJ2 146 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 IGHV5-51A0A0C4DH38 117 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 A0A0D9SEW6 157 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GOLGA8QA0A0J9YX86 632 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GOLGA6L7A0A1B0GV03 622 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GOLGA8OA6NCC3 632 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TUBAL3A6NHL2 446 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PP2D1A8MPX8 630 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 C2orf74A8MZ97 194 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 E9PI62 339 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GOLGA8NF8WBI6 632 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CLDN34H7C241 214 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GOLGA8RI6L899 631 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TXNDC9O14530 226 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TO15178 435 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TCF21O43680 179 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CALUO43852 315 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 KLRC4O43908 158 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CDH16O75309 829 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PALMO75781 387 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ZNF189O75820 626 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 PIGNO95427 931 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 WDPCPO95876 746 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 HLA-DRAP01903 254 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 COX6A1P12074 109 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FOLR1P15328 257 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ABOP16442 354 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 BCL3P20749 454 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PAX7P23759 505 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CHMP24386 653 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 EEF1DP29692 281 aaKnown RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 HOXD13P35453 343 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 DEKP35659 375 aaKnown RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 OPRL1P41146 370 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PIK3CAP42336 1068 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NSG1P42857 185 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 MSH2P43246 934 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GNPDA1P46926 289 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 RAB28P51157 221 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 STC1P52823 247 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GFERP55789 205 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 KCNK10P57789 538 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 VSX2P58304 361 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 RHOAP61586 193 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PSPHP78330 225 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CDR2Q01850 454 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 BCL2L1Q07817 233 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NIPAL4Q0D2K0 466 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ABRQ12979 859 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CALCOCO2Q13137 446 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 RAPSNQ13702 412 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PTK6Q13882 451 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 FAM53BQ14153 422 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CAPRIN1Q14444 709 aaKnown RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 ACKR1Q16570 336 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 MEP1AQ16819 746 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PCGF3Q3KNV8 242 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NKAIN1Q4KMZ8 207 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 BCL7AQ4VC05 210 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ZCWPW2Q504Y3 356 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 C1orf220Q5T0J3 134 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CFAP58Q5T655 872 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 KPRPQ5T749 579 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 NKAIN2Q5VXU1 208 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ATL3Q6DD88 541 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ACAD10Q6JQN1 1059 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GLDNQ6ZMI3 551 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 C11orf57Q6ZUT1 292 aaPredicted RBP1.32□□□□□ -2.2
CD44-212ENST00000524922 VSIG1Q86XK7 387 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ZNF677Q86XU0 584 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 KRTAP11-1Q8IUC1 163 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 BBS5Q8N3I7 341 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 MARVELD2Q8N4S9 558 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TRAM1L1Q8N609 369 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TEX26Q8N6G2 289 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ANKRD42Q8N9B4 389 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 IQUBQ8NA54 791 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 OR52K2Q8NGK3 314 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 OR1J1Q8NGS3 322 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 OR2L2Q8NH16 312 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 GSDMBQ8TAX9 411 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 CCDC110Q8TBZ0 833 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 PROX1Q92786 737 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 SLCO2A1Q92959 643 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 UCN3Q969E3 161 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ZUFSPQ96AP4 578 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TBC1D31Q96DN5 1066 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 EEF2KMTQ96G04 330 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 IMMP1LQ96LU5 166 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TCEANC2Q96MN5 208 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 NUDCD1Q96RS6 583 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 SOSTQ9BQB4 213 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TTYH2Q9BSA4 534 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 ANGPTL4Q9BY76 406 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 VN1R1Q9GZP7 353 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 WWTR1Q9GZV5 400 aa1.32□□□□□ -2.2
CD44-212ENST00000524922 TRABDQ9H4I3 376 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms