RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 XKR7Q5GH72 579 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 CBLN3Q6UW01 205 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 C20orf204Q6ZNR8 217 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 ZCCHC23Q6ZST2 131 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 TRABD2AQ86V40 505 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 LILRA2Q8N149 483 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 IGFBPL1Q8WX77 278 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 ROBO4Q8WZ75 1007 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 ZNF524Q96C55 264 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 STACQ99469 402 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 CXorf36Q9H7Y0 433 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 SNX8Q9Y5X2 465 aa16.78■□□□□ 0.28
PTP4A3-206ENST00000524028 H7C1Q1 480 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PLAUP00749 431 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 HEXAP06865 529 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PPP3CBP16298 524 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 AGTR1P30556 359 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 HPCAL1P37235 193 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 CARD18P57730 90 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PTGR1Q14914 329 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 CDC73Q6P1J9 531 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PRSS57Q6UWY2 283 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PSMA8Q8TAA3 256 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 CHMP6Q96FZ7 201 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 PPP3R2Q96LZ3 170 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 KLHL15Q96M94 604 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 C1orf50Q9BV19 199 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 SRXN1Q9BYN0 137 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 C12orf49Q9H741 205 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 GLRX2Q9NS18 164 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 GPATCH2Q9NW75 528 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 ICAM5Q9UMF0 924 aa16.77■□□□□ 0.28
PTP4A3-206ENST00000524028 ABCA2Q9BZC7 2435 aa16.77■□□□□ 0.27
PTP4A3-206ENST00000524028 FN1P02751 2386 aaKnown RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 UQCRHLA0A096LP55 91 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 TRIM64A6NGJ6 449 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 TRIM64BA6NI03 449 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 TMEM114B3SHH9 223 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 SPAG7O75391 227 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 SLU7O95391 586 aaKnown RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 NTN1O95631 604 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 HSPA4LO95757 839 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 C6orf47O95873 294 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ME2P23368 584 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 SFTPDP35247 375 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 CCT3P49368 545 aaKnown RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 TOMM34Q15785 309 aaPredicted RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 NDUFAF6Q330K2 333 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 BEX5Q5H9J7 111 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 C6orf136Q5SQH8 315 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 PDSS1Q5T2R2 415 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF704Q6ZNC4 412 aaPredicted RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 BEND4Q6ZU67 534 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 KRTCAP2Q8N6L1 136 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 FBXO27Q8NI29 283 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 PHOSPHO1Q8TCT1 267 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ABHD3Q8WU67 409 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 OR5P2Q8WZ92 322 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 COQ8BQ96D53 544 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ACTRT3Q9BYD9 372 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ACTR6Q9GZN1 396 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 EML4Q9HC35 981 aaKnown RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 CARD8Q9Y2G2 431 aa16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 RAI1Q7Z5J4 1906 aaPredicted RBP16.76■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF195O14628 629 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 SMAD7O15105 426 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 MAPK1P28482 360 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 EIF1P41567 113 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 PTH2RP49190 550 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF844Q08AG5 666 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 TP53BP2Q13625 1128 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 ZNF239Q16600 458 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 DCST2Q5T1A1 773 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 IL23RQ5VWK5 629 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 PLEKHM3Q6ZWE6 761 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 NUFIP2Q7Z417 695 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 MTERF4Q7Z6M4 381 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 WFDC8Q8IUA0 241 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 TCP10LQ8TDR4 215 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 RNF128Q8TEB7 428 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 PLPPR2Q96GM1 343 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 TMEM204Q9BSN7 226 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 GSX2Q9BZM3 304 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 ANKZF1Q9H8Y5 726 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 ZDHHC2Q9UIJ5 367 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 GPR52Q9Y2T5 361 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 ARID1AO14497 2285 aa16.75■□□□□ 0.27
PTP4A3-206ENST00000524028 NPIPB9F8W1W9 429 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 TUBBP07437 444 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 CREB1P16220 341 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 PSMB1P20618 241 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 ATP6V1C1P21283 382 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 RPL3P39023 403 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 P2RX1P51575 399 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 TSC22D1Q15714 1073 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 ATP6AP1LQ52LC2 224 aa16.74■□□□□ 0.27
PTP4A3-206ENST00000524028 STK32CQ86UX6 486 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms