RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CAPS2Q9BXY5 557 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 KLHL4Q9C0H6 718 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 OR2B2Q9GZK3 357 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 WWTR1Q9GZV5 400 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 RHOJQ9H4E5 214 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CHODLQ9H9P2 273 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 PARVBQ9HBI1 364 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 EML4Q9HC35 981 aaKnown RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 C20orf96Q9NUD7 363 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CTNNAL1Q9UBT7 734 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 DCDC2Q9UHG0 476 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 PRSS50Q9UI38 385 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 IKZF3Q9UKT9 509 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CORO1CQ9ULV4 474 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 B3GALT5Q9Y2C3 310 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 PLCE1Q9P212 2302 aa5.9□□□□□ -1.47
SDCBP-210ENST00000522843 TMEM120BA0PK00 339 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 TRIM49D1C9J1S8 452 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 H0YC42 278 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 UBFD1O14562 309 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 POLR3GO15318 223 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 EMC8O43402 210 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 TCF21O43680 179 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 VENTXO95231 258 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 WISP3O95389 354 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 MTHFD2P13995 350 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CREB1P16220 341 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 OGNP20774 298 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CHMP24386 653 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CRABP2P29373 138 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 STT3AP46977 705 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 KCNJ5P48544 419 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 PGGT1BP53609 377 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 PLA2G16P53816 162 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 TPD52P55327 224 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SLC37A1P57057 533 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 IRX1P78414 480 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SERTAD2Q14140 314 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CSHL1Q14406 222 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 EFTUD2Q15029 972 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 RBBP5Q15291 538 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZKSCAN8Q15776 578 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF672Q499Z4 452 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ANGPTL8Q6UXH0 198 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SDCCAG8Q86SQ7 713 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 TMPRSS11BQ86T26 416 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZC3HC1Q86WB0 502 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CTAGE3PQ8IX95 158 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 RFLNBQ8N5W9 214 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 WDSUB1Q8N9V3 476 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SEMA6DQ8NFY4 1073 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 RDH11Q8TC12 318 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CKAP2Q8WWK9 683 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 HTRA1Q92743 480 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 MSI2Q96DH6 328 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZMYND19Q96E35 227 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 FBXL20Q96IG2 436 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF845Q96IR2 970 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 FAR2Q96K12 515 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 HS6ST2Q96MM7 605 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF317Q96PQ6 595 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 GAL3ST4Q96RP7 486 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SERINC2Q96SA4 455 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 MAPKAP1Q9BPZ7 522 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 CENPHQ9H3R5 247 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 PELI2Q9HAT8 420 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 GALNT9Q9HCQ5 603 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SERHLQ9NQF3 203 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 FBXO6Q9NRD1 293 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 INTS10Q9NVR2 710 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 COPS7AQ9UBW8 275 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 TBK1Q9UHD2 729 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 FBXO5Q9UKT4 447 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 GRID1Q9ULK0 1009 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 MRPS33Q9Y291 106 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 DLGAP4Q9Y2H0 992 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 PLLPQ9Y342 182 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 PSAT1Q9Y617 370 aa5.89□□□□□ -1.47
SDCBP-210ENST00000522843 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
SDCBP-210ENST00000522843 SYNDIG1LA6NDD5 238 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 SLC22A20A6NK97 555 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 WASHC1A8K0Z3 465 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 C17orf51A8MQB3 221 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 KLF11O14901 512 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 BIRC5O15392 142 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 CLOCKO15516 846 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PRAMEF4O60810 478 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 PRKRAO75569 313 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 HAUS5O94927 633 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ALDOAP04075 364 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 C8GP07360 202 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 CHN1P15882 459 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 B3GALT5-AS1P59052 145 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 STXBP1P61764 594 aaKnown RBP5.88□□□□□ -1.47
SDCBP-210ENST00000522843 HERVK_113P63132 956 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 ERVK-8P63133 956 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 SP140Q13342 867 aa5.88□□□□□ -1.47
SDCBP-210ENST00000522843 THOC5Q13769 683 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms