RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CCKARP32238 428 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 RAC1P63000 192 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 OCRLQ01968 901 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 FOXF1Q12946 379 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 GUSBP1Q15486 140 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 EXOC3L2Q2M3D2 409 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.56■□□□□ 0.56
SDCBP-209ENST00000522243 ANKRD34AQ69YU3 496 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 FAM214BQ7L5A3 538 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 TGIF2LYQ8IUE0 185 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF614Q8N883 585 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 OR2V1Q8NHB1 315 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 ZC3HAV1LQ96H79 300 aaKnown RBP18.56■□□□□ 0.56
SDCBP-209ENST00000522243 SLC39A3Q9BRY0 314 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 MED18Q9BUE0 208 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 TMUB1Q9BVT8 246 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 AKTIPQ9H8T0 292 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 NEUROD4Q9HD90 331 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 ELOVL5Q9NYP7 299 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 CARD8Q9Y2G2 431 aa18.56■□□□□ 0.56
SDCBP-209ENST00000522243 C7orf72A4D263 438 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 SIAH2O43255 324 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 SYNGR4O95473 234 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 PLGP00747 810 aaPredicted RBP18.55■□□□□ 0.56
SDCBP-209ENST00000522243 KRT16P08779 473 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 LINGO3P0C6S8 592 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 BGNP21810 368 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 SHC1P29353 583 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 SFTPDP35247 375 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 UGT2B10P36537 528 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 FGFBP1Q14512 234 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 DEFB113Q30KQ7 82 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 KLHL26Q53HC5 615 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 CEP85LQ5SZL2 805 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 CAMKMTQ7Z624 323 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF527Q8NB42 609 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 RFWD2Q8NHY2 731 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 MOAP1Q96BY2 351 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 ALPK1Q96QP1 1244 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 KLHL4Q9C0H6 718 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 HOXD1Q9GZZ0 328 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 KCNK9Q9NPC2 374 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 MCTS1Q9ULC4 181 aaKnown RBP18.55■□□□□ 0.56
SDCBP-209ENST00000522243 RAP2CQ9Y3L5 183 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 CELSR1Q9NYQ6 3014 aa18.55■□□□□ 0.56
SDCBP-209ENST00000522243 C16orf97H3BN30 126 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 GTPBP1O00178 669 aaKnown RBP18.54■□□□□ 0.56
SDCBP-209ENST00000522243 ADAMDEC1O15204 470 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 BIRC5O15392 142 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 MYZAPP0CAP1 466 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 KLK2P20151 261 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 MATN1P21941 496 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 ME2P23368 584 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 SLC1A6P48664 564 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 P2RX1P51575 399 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 ATP12AP54707 1039 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 CASP9P55211 416 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 CTBP2P56545 445 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 C21orf58P58505 322 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 PPP2R2AP63151 447 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 MPP2Q14168 576 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 TOMM34Q15785 309 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-209ENST00000522243 HBMQ6B0K9 141 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 ESPNLQ6ZVH7 1005 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 OLIG3Q7RTU3 272 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 C6orf120Q7Z4R8 191 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 MTERF4Q7Z6M4 381 aaKnown RBP18.54■□□□□ 0.56
SDCBP-209ENST00000522243 LILRA2Q8N149 483 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 FBXO27Q8NI29 283 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 OSTF1Q92882 214 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 MBD6Q96DN6 1003 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 PIK3IP1Q96FE7 263 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 SORT1Q99523 831 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 SERHL2Q9H4I8 314 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 SSU72Q9NP77 194 aaKnown RBP18.54■□□□□ 0.56
SDCBP-209ENST00000522243 ASIC5Q9NY37 505 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 EMC9Q9Y3B6 208 aa18.54■□□□□ 0.56
SDCBP-209ENST00000522243 DEFB108AA8MXU0 73 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 TM9SF1O15321 606 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 EFNA2O43921 213 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 DHRS4L1P0CG22 281 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 PCYT1AP49585 367 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 RPL14P50914 215 aaKnown RBP18.53■□□□□ 0.56
SDCBP-209ENST00000522243 FOXD4Q12950 439 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-209ENST00000522243 C22orf34Q6ZV56 151 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ATP6V1C2Q8NEY4 427 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ROBO4Q8WZ75 1007 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 GMPPAQ96IJ6 420 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-209ENST00000522243 SLC35G5Q96KT7 338 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 KLHL15Q96M94 604 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ZIM3Q96PE6 472 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 SDF2Q99470 211 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 DPY30Q9C005 99 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 PAQR5Q9NXK6 330 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF226Q9NYT6 803 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ICAM5Q9UMF0 924 aa18.53■□□□□ 0.56
SDCBP-209ENST00000522243 ABCA4P78363 2273 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 RNF103-CHMP3A0A140T963 221 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 NPIPB9F8W1W9 429 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 H3BNH8 94 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms