RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PRSS57Q6UWY2 283 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 BEND4Q6ZU67 534 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 TRABD2AQ86V40 505 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 LILRA2Q8N149 483 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 CIARTQ8N365 385 aaPredicted RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 AGR3Q8TD06 166 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 OSTF1Q92882 214 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 KLHL15Q96M94 604 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 STACQ99469 402 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 MECRQ9BV79 373 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 ACTR6Q9GZN1 396 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 C12orf49Q9H741 205 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 MKS1Q9NXB0 559 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 ROS1P08922 2347 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 NPIPA5A0A0B4J1W7 369 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 NPIPA7E9PJI5 369 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 SMAD7O15105 426 aaKnown RBP13.55□□□□□ -0.24
CSMD1-207ENST00000520451 KLF4O43474 513 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 PEX11AO75192 247 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 NUDT14O95848 222 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 LY6G6DO95868 133 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 TUBBP07437 444 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 NPIPA8P0DM63 369 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 LAMP1P11279 417 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 SHC1P29353 583 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 AGTR1P30556 359 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 CARD18P57730 90 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 TP53BP2Q13625 1128 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 GTF2IRD2BQ6EKJ0 949 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 CDC73Q6P1J9 531 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 ZNF704Q6ZNC4 412 aaPredicted RBP13.55□□□□□ -0.24
CSMD1-207ENST00000520451 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 GTF2IRD2Q86UP8 949 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 BANPQ8N9N5 519 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 OR2W6PQ8NHA6 318 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 ROBO4Q8WZ75 1007 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
CSMD1-207ENST00000520451 BDH2Q9BUT1 245 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 C1orf50Q9BV19 199 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 ACTRT3Q9BYD9 372 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 PIGUQ9H490 435 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
CSMD1-207ENST00000520451 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
CSMD1-207ENST00000520451 TRIM64A6NGJ6 449 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 TRIM64BA6NI03 449 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 OIP5O43482 229 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ELK4P28324 431 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 PTH2RP49190 550 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 CCT3P49368 545 aaKnown RBP13.54□□□□□ -0.24
CSMD1-207ENST00000520451 NR1H2P55055 460 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 PTGR1Q14914 329 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ZNF239Q16600 458 aaKnown RBP13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ATP6AP1LQ52LC2 224 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 XKR7Q5GH72 579 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ALKBH2Q6NS38 261 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ZCCHC23Q6ZST2 131 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
CSMD1-207ENST00000520451 OR56A1Q8NGH5 318 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ADAMTS15Q8TE58 950 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ABHD3Q8WU67 409 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 OR5P2Q8WZ92 322 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ARSGQ96EG1 525 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 PLPPR2Q96GM1 343 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 GSX2Q9BZM3 304 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 CXorf36Q9H7Y0 433 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 ATAD3AQ9NVI7 634 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 CARD8Q9Y2G2 431 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 GPR52Q9Y2T5 361 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 DSCAMO60469 2012 aa13.54□□□□□ -0.24
CSMD1-207ENST00000520451 FN1P02751 2386 aaKnown RBP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 GJE1A6NN92 205 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 H3BNH8 94 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 ZNF195O14628 629 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 SPAG7O75391 227 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 SKAP2O75563 359 aaPredicted RBP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 SLU7O95391 586 aaKnown RBP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 C6orf47O95873 294 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 PLAUP00749 431 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 KRT16P08779 473 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 P2RX1P51575 399 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 KLHL26Q53HC5 615 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 TMEM201Q5SNT2 666 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSMD1-207ENST00000520451 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
CSMD1-207ENST00000520451 CBLN3Q6UW01 205 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms