RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	PHC2	Q8IXK0	858 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	SIX5	Q8N196	739 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	CENPS	Q8N2Z9	138 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	LSMEM1	Q8N8F7	131 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	DNASE2B	Q8WZ79	361 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	CLDN23	Q96B33	292 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	COX4I2	Q96KJ9	171 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	SPACA7	Q96KW9	195 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF426	Q9BUY5	554 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR52D1	Q9H346	318 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	TMEM27	Q9HBJ8	222 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	ATP13A2	Q9NQ11	1180 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	FLRT3	Q9NZU0	649 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	IL20RA	Q9UHF4	553 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	CFL2	Q9Y281	166 aa		11.44	□□□□□ -0.58
SPIDR-210	ENST00000519362	RHPN2P1	A8MT19	583 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	BHLHE40	O14503	412 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	CHP2	O43745	196 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	HYAL3	O43820	417 aa	Predicted RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	SLC2A10	O95528	541 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	CLPS	P04118	112 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	LIMS3	P0CW19	117 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	LIMS4	P0CW20	117 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	IFI30	P13284	250 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	CPE	P16870	476 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	PPP5C	P53041	499 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	BNC1	Q01954	994 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	FGFBP1	Q14512	234 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	GRM7	Q14831	915 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZSWIM7	Q19AV6	140 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	AMZ1	Q400G9	498 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	METTL27	Q8N6F8	245 aa	Predicted RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF615	Q8N8J6	731 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF485	Q8NCK3	441 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	C16orf52	Q8NHV5	167 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	BPIFA2	Q96DR5	249 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	TRMT61A	Q96FX7	289 aa	Known RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	HS6ST2	Q96MM7	605 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR10A5	Q9H207	317 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	ISYNA1	Q9NPH2	558 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	MEPE	Q9NQ76	525 aa	Predicted RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	IRAK4	Q9NWZ3	460 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	LRIT1	Q9P2V4	623 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	CBLC	Q9ULV8	474 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	STUB1	Q9UNE7	303 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	ERVK-19	Q9WJR5	959 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	TMEM5	Q9Y2B1	443 aa		11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	EXOG	Q9Y2C4	368 aa	Known RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.43	□□□□□ -0.58
SPIDR-210	ENST00000519362	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362		A0A1B0GWA3	101 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	WWP2	O00308	870 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PFDN1	O60925	122 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	APOL3	O95236	402 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	FUT1	P19526	365 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CD40LG	P29965	261 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	HTR1F	P30939	366 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	BIK	Q13323	160 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	SERTAD2	Q14140	314 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	LIPK	Q5VXJ0	399 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	RPL13AP3	Q6NVV1	102 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TUBA3E	Q6PEY2	450 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	HSDL2	Q6YN16	418 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CARF	Q8N187	725 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	FANK1	Q8TC84	345 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TM9SF4	Q92544	642 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ARSG	Q96EG1	525 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PELO	Q9BRX2	385 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF649	Q9BS31	505 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	G6PC3	Q9BUM1	346 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CNPPD1	Q9BV87	410 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	MRO	Q9BYG7	248 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TRIM2	Q9C040	744 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ENKD1	Q9H0I2	346 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362		Q9N2J8	555 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	HINT3	Q9NQE9	182 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	LANCL2	Q9NS86	450 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CHCHD3	Q9NX63	227 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	SIGLEC7	Q9Y286	467 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	MED31	Q9Y3C7	131 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	GON4L	Q3T8J9	2241 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	IGHV1OR21-1	A0A087WYE8	117 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TTC36	A6NLP5	189 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TAF4	O00268	1085 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	STK25	O00506	426 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	NUDT21	O43809	227 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CBFA2T3	O75081	653 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PTP4A3	O75365	173 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	RFPL3	O75679	317 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	IGHA1	P01876	353 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	RBM34	P42696	430 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PPM1F	P49593	454 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ATP12A	P54707	1039 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PSMD4	P55036	377 aa	Known RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR1D5	P58170	312 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CFHR1	Q03591	330 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	TPBG	Q13641	420 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	KCNAB1	Q14722	419 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	OXA1L	Q15070	435 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms