RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TRIM45Q9H8W5 580 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 TVP23BQ9NYZ1 205 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 SEC14L3Q9UDX4 400 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 TDRD6O60522 2096 aaKnown RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 KNL1Q8NG31 2342 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 TEX51A0A1B0GUA7 166 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 KDM4EB2RXH2 506 aaPredicted RBP17.03■□□□□ 0.32
SDC2-202ENST00000518385 PLD2O14939 933 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 AKAP8O43823 692 aaKnown RBP17.03■□□□□ 0.32
SDC2-202ENST00000518385 B4GALT2O60909 372 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 SNAPC5O75971 98 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 CRYZL1O95825 349 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 BCHEP06276 602 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 FAM157BP0CG42 384 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 CAPZA2P47755 286 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 INPP1P49441 399 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 TNFRSF17Q02223 184 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 GINS1Q14691 196 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.03■□□□□ 0.324e-11■■□□□ 12.8
SDC2-202ENST00000518385 CCDC58Q4VC31 144 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 CRTC2Q53ET0 693 aaPredicted RBP17.03■□□□□ 0.32
SDC2-202ENST00000518385 GKN2Q86XP6 184 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 YIPF7Q8N8F6 280 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 OR52N1Q8NH53 320 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 SUN3Q8TAQ9 357 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 OTULINQ96BN8 352 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 C1GALT1C1Q96EU7 318 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 PRRC1Q96M27 445 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 SYNPO2LQ9H987 977 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 KCMF1Q9P0J7 381 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 NTMQ9P121 344 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 ALG5Q9Y673 324 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 RNF215Q9Y6U7 377 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 SPACA6W5XKT8 324 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 VCANP13611 3396 aa17.03■□□□□ 0.32
SDC2-202ENST00000518385 SPAG17Q6Q759 2223 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 TLX2O43763 284 aaPredicted RBP17.02■□□□□ 0.32
SDC2-202ENST00000518385 STATHP02808 62 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 IFI6P09912 130 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 CCNYL3P0C7X3 344 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 HK1P19367 917 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 IFNA8P32881 189 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 AP2S1P53680 142 aaPredicted RBP17.02■□□□□ 0.32
SDC2-202ENST00000518385 ATP12AP54707 1039 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 GAS1P54826 345 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 HNRNPKP61978 463 aaKnown RBP eCLIP17.02■□□□□ 0.323e-6■■□□□ 12.9
SDC2-202ENST00000518385 CD83Q01151 205 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 C18orf63Q68DL7 685 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 FAM180BQ6P0A1 224 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 CCDC28AQ8IWP9 274 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 TOR1AIP2Q8NFQ8 470 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 TEX47Q8TBZ9 253 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 SUN5Q8TC36 379 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 LMX1AQ8TE12 382 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 PATE1Q8WXA2 126 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 AKAP1Q92667 903 aaKnown RBP eCLIP17.02■□□□□ 0.32
SDC2-202ENST00000518385 UCN3Q969E3 161 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 LRR1Q96L50 414 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 FYTTD1Q96QD9 318 aaKnown RBP17.02■□□□□ 0.32
SDC2-202ENST00000518385 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.02■□□□□ 0.32
SDC2-202ENST00000518385 OR51I1Q9H343 314 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 SEMA6CQ9H3T2 930 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 ERVMER34-1Q9H9K5 563 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 POMT2Q9UKY4 750 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 CBLCQ9ULV8 474 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 A4GNTQ9UNA3 340 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 SLC22A7Q9Y694 548 aa17.02■□□□□ 0.32
SDC2-202ENST00000518385 H0YGG7 62 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 SYT5O00445 386 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 NDUFB5O43674 189 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 OR2B3O76000 313 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 GNSP15586 552 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ETV5P41161 510 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 FASLGP48023 281 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ETV1P50549 477 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ARF3P61204 181 aaPredicted RBP17.02■□□□□ 0.31
SDC2-202ENST00000518385 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.02■□□□□ 0.31
SDC2-202ENST00000518385 CNIH2Q6PI25 160 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 CCDC116Q8IYX3 515 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ATP6V1C2Q8NEY4 427 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 DEDD2Q8WXF8 326 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ZC3H10Q96K80 434 aaKnown RBP17.02■□□□□ 0.31
SDC2-202ENST00000518385 C10orf90Q96M02 699 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 TMEM121BQ9BXQ6 578 aaPredicted RBP17.02■□□□□ 0.31
SDC2-202ENST00000518385 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.314e-8■■□□□ 13.4
SDC2-202ENST00000518385 CALML5Q9NZT1 146 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 RHCGQ9UBD6 479 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 RABL2AQ9UBK7 228 aaPredicted RBP17.02■□□□□ 0.31
SDC2-202ENST00000518385 PILRBQ9UKJ0 227 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 DAPP1Q9UN19 280 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 RABL2BQ9UNT1 228 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 LIPT1Q9Y234 373 aa17.02■□□□□ 0.31
SDC2-202ENST00000518385 ZDBF2Q9HCK1 2354 aa17.01■□□□□ 0.31
SDC2-202ENST00000518385 A0A0B4J293 547 aa17.01■□□□□ 0.31
SDC2-202ENST00000518385 A0A0G2JPF8 293 aa17.01■□□□□ 0.31
SDC2-202ENST00000518385 A0A1B0GVT2 93 aa17.01■□□□□ 0.31
SDC2-202ENST00000518385 GLOD5A6NK44 160 aa17.01■□□□□ 0.31
SDC2-202ENST00000518385 A6NL46 340 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms