RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SLC35B4Q969S0 331 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CLIP3Q96DZ5 547 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 HS6ST2Q96MM7 605 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 DPYSL5Q9BPU6 564 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 TRIM2Q9C040 744 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 FGF21Q9NSA1 209 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 SIDT1Q9NXL6 827 aaKnown RBP24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CLEC2DQ9UHP7 191 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 MED31Q9Y3C7 131 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 LAMA1P25391 3075 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 A0A1B0GWA3 101 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 SURF4O15260 269 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CHP2O43745 196 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 DYRK3O43781 588 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 ADAM11O75078 769 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CH25HO95992 272 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 RPLP0P05388 317 aaKnown RBP24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CKMT1AP12532 417 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 TDGF1P13385 188 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 PNLIPP16233 465 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 SLC37A1P57057 533 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 KLHL22Q53GT1 634 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 CMIPQ8IY22 773 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 ZNF321PQ8N8H1 164 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 ANKK1Q8NFD2 765 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 OR2T33Q8NG76 320 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 OR52I1Q8NGK6 324 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 ATP13A2Q9NQ11 1180 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 PRMT8Q9NR22 394 aaPredicted RBP24.49■■□□□ 1.51
COL13A1-210ENST00000517713 IL20RAQ9UHF4 553 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 TMEM5Q9Y2B1 443 aa24.49■■□□□ 1.51
COL13A1-210ENST00000517713 KDM4EB2RXH2 506 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 KPNA4O00629 521 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 ZXDAP98168 799 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 NR0B2Q15466 257 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 DGUOKQ16854 277 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 YOD1Q5VVQ6 348 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 TMEM71Q6P5X7 295 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 ZSCAN1Q8NBB4 408 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 OR4C3Q8NH37 302 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 BRIX1Q8TDN6 353 aaKnown RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 ZHX1-C8orf76Q96EF9 292 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 PLEKHA8Q96JA3 519 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 MND1Q9BWT6 205 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 DIMT1Q9UNQ2 313 aaKnown RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 LSM2Q9Y333 95 aaKnown RBP24.48■■□□□ 1.51
COL13A1-210ENST00000517713 SDK1Q7Z5N4 2213 aa24.48■■□□□ 1.51
COL13A1-210ENST00000517713 A0A1B0GX78 115 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 RAB36O95755 333 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 TGFBR1P36897 503 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 C1orf189Q5VU69 101 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 LSMEM1Q8N8F7 131 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 MAFAQ8NHW3 353 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 SAP25Q8TEE9 199 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 BPIFA2Q96DR5 249 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 SLC46A1Q96NT5 459 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 OR52D1Q9H346 318 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 HHATLQ9HCP6 504 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 FSCN3Q9NQT6 498 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 MED17Q9NVC6 651 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 MRPS18AQ9NVS2 196 aaKnown RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 ATXN7L1Q9ULK2 861 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 CLCA3PQ9Y6N3 262 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 CPED1A4D0V7 1026 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 TOX3O15405 576 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 FUT1P19526 365 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 GRK5P34947 590 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 TSTQ16762 297 aaKnown RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 VWA2Q5GFL6 755 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 ARHGAP40Q5TG30 622 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 TMPRSS11FQ6ZWK6 438 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 NANOGP1Q8N7R0 232 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 OR4C6Q8NH72 309 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 OR8D2Q9GZM6 311 aa24.47■■□□□ 1.51
COL13A1-210ENST00000517713 TNRC6BQ9UPQ9 1833 aaKnown RBP24.47■■□□□ 1.51
COL13A1-210ENST00000517713 A0A1B0GVG6 124 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 SERINC4A6NH21 518 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 CSO75390 466 aaKnown RBP24.46■■□□□ 1.51
COL13A1-210ENST00000517713 NADKO95544 446 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-210ENST00000517713 HMGN1P05114 100 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 ZGLP1P0C6A0 271 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 RORAP35398 523 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 BMXP51813 675 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 CTBP2P56545 445 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 HLA-BQ31612 363 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 ZNF829Q3KNS6 432 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-210ENST00000517713 GUSBP11Q6P575 273 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 HSDL2Q6YN16 418 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 C7orf57Q8NEG2 295 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 FANK1Q8TC84 345 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 PIGKQ92643 395 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 RNFT2Q96EX2 444 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 UBQLN3Q9H347 655 aa24.46■■□□□ 1.51
COL13A1-210ENST00000517713 IRGMA1A4Y4 181 aa24.45■■□□□ 1.51
COL13A1-210ENST00000517713 POLR1CO15160 346 aaPredicted RBP24.45■■□□□ 1.51
COL13A1-210ENST00000517713 PRKNO60260 465 aaPredicted RBP24.45■■□□□ 1.51
COL13A1-210ENST00000517713 CSTAP01040 98 aa24.45■■□□□ 1.51
COL13A1-210ENST00000517713 UGT2B10P36537 528 aa24.45■■□□□ 1.51
COL13A1-210ENST00000517713 PPICP45877 212 aa24.45■■□□□ 1.51
COL13A1-210ENST00000517713 RAB40BQ12829 278 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms