RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 THAP4Q8WY91 577 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR1F2PQ96R84 312 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FXYD6Q9H0Q3 95 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 LMAN1LQ9HAT1 526 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRPV4Q9HBA0 871 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 COQ3Q9NZJ6 369 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 USP36Q9P275 1121 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PLEKHA6Q9Y2H5 1048 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SMLR1H3BR10 107 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 IGFBP1P08833 259 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ANXA3P12429 323 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PEPDP12955 493 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC6A12P48065 614 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PRLHRP49683 370 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 GALK2Q01415 458 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SNTA1Q13424 505 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PAQR6Q6TCH4 344 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 WBP2Q969T9 261 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC41A3Q96GZ6 507 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR2A14Q96R47 310 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PELI2Q9HAT8 420 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ACTR10Q9NZ32 417 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SLC22A31A6NKX4 558 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PPM1BO75688 479 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 NCR1O76036 304 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRAPPC2P0DI81 140 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRAPPC2BP0DI82 140 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 XCR1P46094 333 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CSNK1DP48730 415 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 GPR143P51810 404 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SF3A2Q15428 464 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SYPL1Q16563 259 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 LCTLQ6UWM7 567 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMPRSS12Q86WS5 348 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PRR22Q8IZ63 422 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 HORMAD2Q8N7B1 307 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR6C4Q8NGE1 309 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TOE1Q96GM8 510 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 DHRS1Q96LJ7 313 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 DPCDQ9BVM2 203 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 C8orf33Q9H7E9 229 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FOLH1BQ9HBA9 442 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 MGAT4AQ9UM21 535 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 TRAPPC13A5PLN9 417 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 GPR89AB7ZAQ6 455 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 GPR89BP0CG08 455 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 HMGA1P17096 107 aaKnown RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 EN2P19622 333 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 RABIFP47224 123 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 SEC23BQ15437 767 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 NTRK2Q16620 822 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM26DQ5JW98 314 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM69BQ5VUD6 431 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 KCTD18Q6PI47 426 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF227Q86WZ6 799 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 GPALPP1Q8IXQ4 340 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 PIAS4Q8N2W9 510 aaPredicted RBP10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF283Q8N7M2 679 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CLDN22Q8N7P3 220 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CASTOR1Q8WTX7 329 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 CCDC120Q96HB5 630 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 MYNNQ9NPC7 610 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 FTSJ1Q9UET6 329 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 DKKL1Q9UK85 242 aa10.16□□□□□ -0.78
PCDHGA1-202ENST00000517417 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR14I1A6ND48 311 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 POLR1CO15160 346 aaPredicted RBP10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ICMTO60725 284 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 CLUP10909 449 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 MYOGP15173 224 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 MAPK3P27361 379 aaPredicted RBP10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 FXYD6P3P58550 94 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 PUDPQ08623 228 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ASAH1Q13510 395 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ATXN7L3Q14CW9 347 aaPredicted RBP10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 PODNL1Q6PEZ8 512 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 PLXDC1Q8IUK5 500 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 CCDC71Q8IV32 467 aaPredicted RBP10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMEFF1Q8IYR6 380 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 LDAHQ9H6V9 325 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 RANBP3Q9H6Z4 567 aaPredicted RBP10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 H3BNC9 293 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 NPC1O15118 1278 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 APBB3O95704 486 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 IMPA1P29218 277 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 TEKQ02763 1124 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 TAP2Q03519 686 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ILKQ13418 452 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 CCSMST1Q4G0I0 132 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 ZNF385BQ569K4 471 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 P4HA3Q7Z4N8 544 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMIEQ8NEW7 156 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 EID2BQ96D98 161 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 HS6ST2Q96MM7 605 aa10.15□□□□□ -0.78
PCDHGA1-202ENST00000517417 NCDNQ9UBB6 729 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms