RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	KLHL15	Q96M94	604 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	CCL19	Q99731	98 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	NPAS1	Q99742	590 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	C1orf50	Q9BV19	199 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	HOXD1	Q9GZZ0	328 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	OR10A4	Q9H209	315 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	TMEM185B	Q9H7F4	350 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	CXorf36	Q9H7Y0	433 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	UBTD1	Q9HAC8	227 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	PLSCR4	Q9NRQ2	329 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	GPATCH2	Q9NW75	528 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	FBXO34	Q9NWN3	711 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	FAF1	Q9UNN5	650 aa	Predicted RBP	11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	SNX8	Q9Y5X2	465 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514	ACTL7B	Q9Y614	415 aa		11.04	□□□□□ -0.64
CDK18-223	ENST00000515514		H3BNH8	94 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	SMPD2	O60906	423 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	SPAG7	O75391	227 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	C6orf47	O95873	294 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	TUBB	P07437	444 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	PABPC4L	P0CB38	370 aa	Known RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	LAMP1	P11279	417 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	NID1	P14543	1247 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	HOXB4	P17483	251 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	PRPS1L1	P21108	318 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	LOX	P28300	417 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ADH6	P28332	368 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	AGTR1	P30556	359 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ARRB2	P32121	409 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	CCT3	P49368	545 aa	Known RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	P2RX1	P51575	399 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	NR1H2	P55055	460 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	VSNL1	P62760	191 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	MAD2L1	Q13257	205 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ACKR1	Q16570	336 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	EXOC3L2	Q2M3D2	409 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	LSM12	Q3MHD2	195 aa	Known RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	SPDYE7P	Q495Y7	208 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	KLHL26	Q53HC5	615 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	BEX5	Q5H9J7	111 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	C6orf136	Q5SQH8	315 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	EMB	Q6PCB8	327 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	STAC2	Q6ZMT1	411 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	STK32C	Q86UX6	486 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	PHOSPHO1	Q8TCT1	267 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ADAMTS15	Q8TE58	950 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	RNF128	Q8TEB7	428 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	CPNE4	Q96A23	557 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	COQ8B	Q96D53	544 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	C3orf30	Q96M34	536 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ZIM3	Q96PE6	472 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	HS3ST6	Q96QI5	342 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	PRPF18	Q99633	342 aa	Known RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	KLHDC3	Q9BQ90	382 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	KLHL4	Q9C0H6	718 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	ASIC5	Q9NY37	505 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	CLEC4A	Q9UMR7	237 aa		11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	GPC6	Q9Y625	555 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK18-223	ENST00000515514	VPS13C	Q709C8	3753 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514		A0A0J9YW62	118 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	GJE1	A6NN92	205 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	NPIPB9	F8W1W9	429 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	SLU7	O95391	586 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	NUDT14	O95848	222 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	BPGM	P07738	259 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	INHBB	P09529	407 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	PSMB1	P20618	241 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	ETV4	P43268	484 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	RNPS1	Q15287	305 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	IL23R	Q5VWK5	629 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	GTF2IRD2B	Q6EKJ0	949 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	BHLHB9	Q6PI77	547 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	BEND4	Q6ZU67	534 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	GTF2IRD2	Q86UP8	949 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	P3H2	Q8IVL5	708 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	RIMKLA	Q8IXN7	391 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	LILRA2	Q8N149	483 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	AEN	Q8WTP8	325 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	TUBGCP3	Q96CW5	907 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	GSX1	Q9H4S2	264 aa	Predicted RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	GP6	Q9HCN6	339 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	TIGAR	Q9NQ88	270 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	NOP53	Q9NZM5	478 aa	Known RBP	11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	ZDHHC2	Q9UIJ5	367 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	ICAM5	Q9UMF0	924 aa		11.02	□□□□□ -0.65
CDK18-223	ENST00000515514	NSD1	Q96L73	2696 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	FAM171A2	A8MVW0	826 aa		11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	TYROBP	O43914	113 aa		11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	AK1	P00568	194 aa		11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	THBD	P07204	575 aa		11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	SHC1	P29353	583 aa		11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	ADSL	P30566	484 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK18-223	ENST00000515514	SFTPD	P35247	375 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms