RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZNF311Q5JNZ3 666 aa9□□□□□ -0.97
VCAN-210ENST00000513960 HBMQ6B0K9 141 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ZNF765Q7L2R6 523 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PRICKLE2Q7Z3G6 844 aa9□□□□□ -0.97
VCAN-210ENST00000513960 C12orf40Q86WS4 652 aa9□□□□□ -0.97
VCAN-210ENST00000513960 CYB561A3Q8NBI2 242 aa9□□□□□ -0.97
VCAN-210ENST00000513960 RELL2Q8NC24 303 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 OR2L2Q8NH16 312 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ACOT12Q8WYK0 555 aa9□□□□□ -0.97
VCAN-210ENST00000513960 SMPDL3AQ92484 453 aa9□□□□□ -0.97
VCAN-210ENST00000513960 SAMD8Q96LT4 415 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ORAI3Q9BRQ5 295 aa9□□□□□ -0.97
VCAN-210ENST00000513960 MCOLN1Q9GZU1 580 aa9□□□□□ -0.97
VCAN-210ENST00000513960 HPF1Q9NWY4 346 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ZSCAN32Q9NX65 697 aa9□□□□□ -0.97
VCAN-210ENST00000513960 KLHL28Q9NXS3 571 aa9□□□□□ -0.97
VCAN-210ENST00000513960 GPR34Q9UPC5 381 aa9□□□□□ -0.97
VCAN-210ENST00000513960 KIAA1671Q9BY89 1806 aa9□□□□□ -0.97
VCAN-210ENST00000513960 FEZF1A0PJY2 475 aa9□□□□□ -0.97
VCAN-210ENST00000513960 UBE2QL1A1L167 161 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ZNF593O00488 134 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 MAGEB4O15481 346 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 HYAL3O43820 417 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 VEGFDO43915 354 aa9□□□□□ -0.97
VCAN-210ENST00000513960 GYPBP06028 91 aa9□□□□□ -0.97
VCAN-210ENST00000513960 HOXD4P09016 255 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 GSTM3P21266 225 aa9□□□□□ -0.97
VCAN-210ENST00000513960 VIPR2P41587 438 aa9□□□□□ -0.97
VCAN-210ENST00000513960 NCBP2P52298 156 aaKnown RBP eCLIP9□□□□□ -0.97
VCAN-210ENST00000513960 NDUFA9Q16795 377 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PLA1AQ53H76 456 aa9□□□□□ -0.97
VCAN-210ENST00000513960 HES5Q5TA89 166 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ZNF770Q6IQ21 691 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 AMZ2Q86W34 360 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ADGRG3Q86Y34 549 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ACBD7Q8N6N7 88 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ZNF454Q8N9F8 522 aa9□□□□□ -0.97
VCAN-210ENST00000513960 TMIEQ8NEW7 156 aa9□□□□□ -0.97
VCAN-210ENST00000513960 TFGQ92734 400 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 NXPE3Q969Y0 559 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ORAI1Q96D31 301 aa9□□□□□ -0.97
VCAN-210ENST00000513960 MKL2Q9ULH7 1088 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PRRT4C9JH25 899 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PRKRAO75569 313 aaKnown RBP9□□□□□ -0.97
VCAN-210ENST00000513960 RPN2P04844 631 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PTHLHP12272 177 aa9□□□□□ -0.97
VCAN-210ENST00000513960 BMP7P18075 431 aa9□□□□□ -0.97
VCAN-210ENST00000513960 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
VCAN-210ENST00000513960 CLDN12P56749 244 aa9□□□□□ -0.97
VCAN-210ENST00000513960 HTR4Q13639 388 aa9□□□□□ -0.97
VCAN-210ENST00000513960 PDE7AQ13946 482 aa9□□□□□ -0.97
VCAN-210ENST00000513960 TCEA2Q15560 299 aa9□□□□□ -0.97
VCAN-210ENST00000513960 C9orf64Q5T6V5 341 aa9□□□□□ -0.97
VCAN-210ENST00000513960 LRRN1Q6UXK5 716 aa9□□□□□ -0.97
VCAN-210ENST00000513960 IKBIPQ70UQ0 350 aa9□□□□□ -0.97
VCAN-210ENST00000513960 OR52L1Q8NGH7 329 aa9□□□□□ -0.97
VCAN-210ENST00000513960 OR51L1Q8NGJ5 315 aa9□□□□□ -0.97
VCAN-210ENST00000513960 OR5AR1Q8NGP9 310 aa9□□□□□ -0.97
VCAN-210ENST00000513960 ADAMTS14Q8WXS8 1223 aa9□□□□□ -0.97
VCAN-210ENST00000513960 SUSD6Q92537 303 aa9□□□□□ -0.97
VCAN-210ENST00000513960 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
VCAN-210ENST00000513960 AIF1LQ9BQI0 150 aa9□□□□□ -0.97
VCAN-210ENST00000513960 C20orf85Q9H1P6 137 aa9□□□□□ -0.97
VCAN-210ENST00000513960 WDR26Q9H7D7 661 aa9□□□□□ -0.97
VCAN-210ENST00000513960 TAAR2Q9P1P5 351 aa9□□□□□ -0.97
VCAN-210ENST00000513960 SLC27A6Q9Y2P4 619 aa9□□□□□ -0.97
VCAN-210ENST00000513960 KIAA0355O15063 1070 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 LILRB5O75023 590 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 NFATC1O95644 943 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 CBX7O95931 251 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 WNT1P04628 370 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 LINC00271P0C7V0 271 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SAGP10523 405 aaPredicted RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 RAB3BP20337 219 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 CFL1P23528 166 aaKnown RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 GDNFP39905 211 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 OPRD1P41143 372 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SSR2P43308 183 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 KCNJ5P48544 419 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 CAMK2DQ13557 499 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TMEM201Q5SNT2 666 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 OR5M10Q6IEU7 315 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 CACUL1Q86Y37 369 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 DCUN1D3Q8IWE4 304 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 OR5W2Q8NH69 310 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SPPL3Q8TCT6 385 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 RADILQ96JH8 1075 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 ZDHHC5Q9C0B5 715 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 GHITMQ9H3K2 345 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TAS2R3Q9NYW6 316 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TAC3Q9UHF0 121 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 KIAA0100Q14667 2235 aaKnown RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 RPS10-NUDT3A0A1W2PQS6 291 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TBC1D3BA6NDS4 549 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TRABD2BA6NFA1 517 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 H7C2Y5 167 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 ANXA7P20073 488 aaKnown RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 F8A1P23610 371 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms