RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 DNAJA4Q8WW22 397 aaPredicted RBP3.44□□□□□ -1.86
GYPB-214ENST00000513557 MCUR1Q96AQ8 359 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 C19orf60Q96EN9 201 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 CDX2Q99626 313 aaPredicted RBP3.44□□□□□ -1.86
GYPB-214ENST00000513557 NDUFAF3Q9BU61 184 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 RBM24Q9BX46 236 aaKnown RBP3.44□□□□□ -1.86
GYPB-214ENST00000513557 CLEC7AQ9BXN2 247 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 KRTAP4-5Q9BYR2 181 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 WDR13Q9H1Z4 485 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 SLC26A1Q9H2B4 701 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 PRO3102Q9H379 93 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 SGK2Q9HBY8 427 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 TECRQ9NZ01 308 aaKnown RBP3.44□□□□□ -1.86
GYPB-214ENST00000513557 P2RX2Q9UBL9 471 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 LHX3Q9UBR4 397 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 PYGO1Q9Y3Y4 419 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 CSNK1G3Q9Y6M4 447 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 BAZ2AQ9UIF9 1905 aaKnown RBP3.44□□□□□ -1.86
GYPB-214ENST00000513557 ARID2Q68CP9 1835 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 ZMYM6O95789 1325 aa3.44□□□□□ -1.86
GYPB-214ENST00000513557 LAMB1P07942 1786 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ALPK3Q96L96 1907 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PLXNB2O15031 1838 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 LOC105371242A0A075B767 164 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SHISA7A6NL88 538 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 YJEFN3A6XGL0 299 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ANHXE9PGG2 379 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 NPIPB9F8W1W9 429 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 KIF2AO00139 706 aaPredicted RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 ZNF264O43296 627 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 FCMRO60667 390 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SCGNO76038 276 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 NXPH2O95156 264 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 CLDN1O95832 211 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ANGPTL1O95841 491 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SNAI1O95863 264 aaPredicted RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 OTCP00480 354 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 AMBPP02760 352 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 UBTFL6P0CB48 400 aaPredicted RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 ZCCHC18P0CG32 403 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 GOLGA8HP0CJ92 632 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 TROVE2P10155 538 aaKnown RBP eCLIP3.43□□□□□ -1.86
GYPB-214ENST00000513557 PNMTP11086 282 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 MYOGP15173 224 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 GLRA1P23415 457 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 FHITP49789 147 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 LIMK2P53671 638 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ABCE1P61221 599 aaKnown RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 DHODHQ02127 395 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 MESDQ14696 234 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 MTF1Q14872 753 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 EXOSC7Q15024 291 aaKnown RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 SYCP1Q15431 976 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ZSWIM7Q19AV6 140 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 HLA-BQ31612 363 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 LRIT3Q3SXY7 679 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SPANXN2Q5MJ10 180 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ADAMTSL4-AS1Q5T5F5 129 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PRAMEF5Q5TYX0 476 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PRAMEF6Q5VXH4 476 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 CLEC2AQ6UVW9 174 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 BZW1Q7L1Q6 419 aaKnown RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 GOLGA7Q7Z5G4 137 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 LHFPL4Q7Z7J7 247 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SERINC5Q86VE9 423 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 CATSPERDQ86XM0 798 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PARP8Q8N3A8 854 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ARFGAP2Q8N6H7 521 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ZNF321PQ8N8H1 164 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SYT14Q8NB59 555 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SPATA4Q8NEY3 305 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 OR9Q2Q8NGE9 314 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 FAM76AQ8TAV0 307 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 SPRYD4Q8WW59 207 aaPredicted RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 TCP11Q8WWU5 503 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 TMEM37Q8WXS4 190 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 STARD8Q92502 1023 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 OSTF1Q92882 214 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 MCHR2Q969V1 340 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 FBXO17Q96EF6 278 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PCED1BQ96HM7 432 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PRICKLE1Q96MT3 831 aaPredicted RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 VSTM2LQ96N03 204 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 CHP1Q99653 195 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 OMDQ99983 421 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 DGCR6LQ9BY27 220 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 NEK6Q9HC98 313 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 GDF3Q9NR23 364 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 PLCXD1Q9NUJ7 323 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 UTP6Q9NYH9 597 aaKnown RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 WWOXQ9NZC7 414 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 NYAP2Q9P242 653 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 KLK11Q9UBX7 282 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 ZNF580Q9UK33 172 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 KIAA1257Q9ULG3 409 aa3.43□□□□□ -1.86
GYPB-214ENST00000513557 DIMT1Q9UNQ2 313 aaKnown RBP3.43□□□□□ -1.86
GYPB-214ENST00000513557 B9D1Q9UPM9 204 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms