RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 MRPL2Q5T653 305 aaKnown RBP13.64□□□□□ -0.23
NUP54-213ENST00000513352 FNDC7Q5VTL7 733 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 CMIPQ8IY22 773 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 TMEM251Q8N6I4 163 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 WDSUB1Q8N9V3 476 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 SMYD1Q8NB12 490 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 OR2M3Q8NG83 312 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 FAM162AQ96A26 154 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 MCUR1Q96AQ8 359 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 BTBD10Q9BSF8 475 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 EXO5Q9H790 373 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 PTGES2Q9H7Z7 377 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 OLAHQ9NV23 265 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 FBXL2Q9UKC9 423 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
NUP54-213ENST00000513352 SVILO95425 2214 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 PCNX3Q9H6A9 2034 aa13.64□□□□□ -0.23
NUP54-213ENST00000513352 NPIPA5E9PKD4 350 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 M0QX08 132 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 CBR3O75828 277 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 IFNA14P01570 189 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 HSD17B1P14061 328 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 HTR1EP28566 365 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 ZNF41P51814 821 aaPredicted RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 MLLT10P55197 1068 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 PCBP3P57721 371 aaKnown RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 CEACAM7Q14002 265 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 RNFT1Q5M7Z0 435 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 PRICKLE2Q7Z3G6 844 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 ARHGAP24Q8N264 748 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 FAM109AQ8N4B1 249 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 TOR1AIP2Q8NFQ8 470 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 CCDC124Q96CT7 223 aaKnown RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 SLC7A6OSQ96CW6 309 aaPredicted RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 SNRNP40Q96DI7 357 aaKnown RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 ARSGQ96EG1 525 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 CLPTM1LQ96KA5 538 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 DEFB127Q9H1M4 99 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 LDAHQ9H6V9 325 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 ZNF703Q9H7S9 590 aaPredicted RBP13.63□□□□□ -0.23
NUP54-213ENST00000513352 AGPAT4Q9NRZ5 378 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 RLIMQ9NVW2 624 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 NPIPA1Q9UND3 350 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 NTNG1Q9Y2I2 539 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 COL6A6A6NMZ7 2263 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 HEATR5AQ86XA9 2040 aa13.63□□□□□ -0.23
NUP54-213ENST00000513352 ADAM10O14672 748 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 EIF4E2O60573 245 aaKnown RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 BCAS1O75363 584 aaPredicted RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 GLSO94925 669 aaPredicted RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 MFN2O95140 757 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 GGT1P19440 569 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 DPP4P27487 766 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 MSX1P28360 303 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 RYKP34925 604 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 PGM1P36871 562 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 P2RX1P51575 399 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 EEF1A1P68104 462 aaKnown RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 DMTNQ08495 405 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 SKP2Q13309 424 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 RNF220Q5VTB9 566 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 AP1ARQ63HQ0 302 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 CBLN3Q6UW01 205 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 CCDC80Q76M96 950 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 CLIP4Q8N3C7 705 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 FADS6Q8N9I5 356 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 OR14L1PQ8NHC6 308 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 CPT1CQ8TCG5 803 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 TAMM41Q96BW9 452 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 NTNG2Q96CW9 530 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 TPD52L3Q96J77 140 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 PINK1Q9BXM7 581 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 KLHL28Q9NXS3 571 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 DNAJB12Q9NXW2 375 aaKnown RBP13.62□□□□□ -0.23
NUP54-213ENST00000513352 CD300AQ9UGN4 299 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 MAGEL2Q9UJ55 1249 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 VDAC3Q9Y277 283 aa13.62□□□□□ -0.23
NUP54-213ENST00000513352 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 TPST1O60507 370 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 GCM2O75603 506 aaPredicted RBP13.61□□□□□ -0.23
NUP54-213ENST00000513352 STAMBPO95630 424 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 ZNF682O95780 498 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 CELA3AP09093 270 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 HK1P19367 917 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 ME2P23368 584 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 KDELR2P33947 212 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 ADH7P40394 386 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 SUMO3P55854 103 aaPredicted RBP13.61□□□□□ -0.23
NUP54-213ENST00000513352 DSCR4P56555 118 aaPredicted RBP13.61□□□□□ -0.23
NUP54-213ENST00000513352 NCALDP61601 193 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 BNIP2Q12982 314 aa13.61□□□□□ -0.23
NUP54-213ENST00000513352 CBFBQ13951 182 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms