RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HEPACAMQ14CZ8 416 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 TIMM23BQ5SRD1 257 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 PDSS1Q5T2R2 415 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 LIPNQ5VXI9 398 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 HOXB13Q92826 284 aaPredicted RBP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 CPNE4Q96A23 557 aaPredicted RBP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 AMDHD1Q96NU7 426 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF300Q96RE9 604 aaPredicted RBP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 USB1Q9BQ65 265 aaKnown RBP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 PSD2Q9BQI7 771 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 ERP44Q9BS26 406 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 EQTNQ9NQ60 294 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 A0A1W2PR80 420 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 PRKD3O94806 890 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 PABPC4LP0CB38 370 aaKnown RBP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 EGR1P18146 543 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 HSD17B3P37058 310 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 SERPINB8P50452 374 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 FABP6P51161 128 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF83P51522 516 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 EFNA4P52798 201 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 PSMD4P55036 377 aaKnown RBP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 SLC29A2Q14542 456 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 CR1LQ2VPA4 569 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 GLE1Q53GS7 698 aaKnown RBP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 FBXL14Q8N1E6 418 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 TMEM151AQ8N4L1 468 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF75CPQ92670 426 aaPredicted RBP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 C3orf49Q96BT1 292 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 BCO1Q9HAY6 547 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 GP6Q9HCN6 339 aa16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 MRTO4Q9UKD2 239 aaKnown RBP16.74■□□□□ 0.27
HMGCS1-206ENST00000511774 TRRAPQ9Y4A5 3859 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 OR5H1A6NKK0 313 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 A8MT66 165 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 CCDC188H7C350 402 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 NGFRP08138 427 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 PYGBP11216 843 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 HSD3B1P14060 373 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 CD40P25942 277 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 HSD3B2P26439 372 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 MAGEA12P43365 314 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 RNF144AP50876 292 aaPredicted RBP16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 BTKQ06187 659 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 ACSM2AQ08AH3 577 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 C2orf80Q0P641 193 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 CALCOCO2Q13137 446 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 TMEM176BQ3YBM2 270 aaPredicted RBP16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 ACSM2BQ68CK6 577 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 FAM71E1Q6IPT2 247 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 GALNT18Q6P9A2 607 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 SLC22A25Q6T423 547 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF433Q8N7K0 673 aaPredicted RBP16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 CDC26Q8NHZ8 85 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 FBXO30Q8TB52 745 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 GPR151Q8TDV0 419 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 MUCL1Q96DR8 90 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 REXO5Q96IC2 774 aaKnown RBP16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF195O14628 629 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 RAD51CO43502 376 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 KIAA0513O60268 411 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 SMIM24O75264 130 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 NKX2-2O95096 273 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 KCNH1O95259 989 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 RBP1P09455 135 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 ANXA4P09525 319 aaPredicted RBP16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 ACP2P11117 423 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 GGT1P19440 569 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 NR4A2P43354 598 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 SQLEQ14534 574 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 TOMM34Q15785 309 aaPredicted RBP16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 FAM174BQ3ZCQ3 159 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 ZDHHC24Q6UX98 284 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF551Q7Z340 670 aaPredicted RBP16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 OR52N5Q8NH56 324 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 FBXO27Q8NI29 283 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 FAM110BQ8TC76 370 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 FBXO25Q8TCJ0 367 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 TAS2R7Q9NYW3 318 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 POU2F3Q9UKI9 436 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 TMCO1Q9UM00 188 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 SLC25A15Q9Y619 301 aa16.72■□□□□ 0.27
HMGCS1-206ENST00000511774 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 A0A1W2PNR3 127 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 RGS14O43566 566 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 TCF21O43680 179 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 RAD51DO75771 328 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 SLITRK5O94991 958 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 KCNK2O95069 426 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 TGFAP01135 160 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 CSF3P09919 207 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 APEHP13798 732 aaKnown RBP16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 HNF1AP20823 631 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 PLTPP55058 493 aa16.71■□□□□ 0.27
HMGCS1-206ENST00000511774 FOXG1P55316 489 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms