RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PRPF19Q9UMS4 504 aaKnown RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 EIF3LQ9Y262 564 aaKnown RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 PLLPQ9Y342 182 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MAD1L1Q9Y6D9 718 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 DOCK4Q8N1I0 1966 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 EML6Q6ZMW3 1958 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 IGLV3-10A0A075B6K4 115 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 A0A087WYN8 130 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NSG1A0A0A6YYJ2 146 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 A0A0J9YVX5 310 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TCRBV9S1A1TA0A576 114 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 C2orf81A6NN90 581 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TRIM49D1C9J1S8 452 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 H0YJX3 145 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 APOC4-APOC2K7ER74 178 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SLC22A2O15244 555 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 GLRA3O75311 464 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 METTL18O95568 372 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 IGSF6O95976 241 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CLPTM1O96005 669 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 IFNB1P01574 187 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 APOC2P02655 101 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 BPGMP07738 259 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CD48P09326 243 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ZSCAN5DPP0CG00 497 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CDH5P33151 784 aaPredicted RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 RPL22P35268 128 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 GJC1P36383 396 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 FDFT1P37268 417 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NSG1P42857 185 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 MAGEA6P43360 314 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 AQP5P55064 265 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 AQP4P55087 323 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 RHOAP61586 193 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SORDQ00796 357 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 EEF1A2Q05639 463 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 BST1Q10588 318 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 STX3Q13277 289 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NAB1Q13506 487 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CUL2Q13617 745 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 APOFQ13790 326 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 IHHQ14623 411 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 IL13RA2Q14627 380 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 KCNJ11Q14654 390 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CYTH1Q15438 398 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TRIP10Q15642 601 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CHI3L2Q15782 390 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 HADHQ16836 314 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 AP5B1Q2VPB7 878 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 RUNDC3AQ59EK9 446 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 RIPPLY2Q5TAB7 128 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SLC25A25Q6KCM7 469 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ARHGAP11AQ6P4F7 1023 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SPSB3Q6PJ21 355 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 DHRS4L2Q6PKH6 230 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 UNC5DQ6UXZ4 953 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TIFABQ6ZNK6 161 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CDHR3Q6ZTQ4 885 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NUDCD3Q8IVD9 361 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TMEM178AQ8NBL3 297 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TMEM35BQ8NCS4 154 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 ECHDC3Q96DC8 303 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 DCUN1D1Q96GG9 259 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 RILPQ96NA2 401 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SERPINI1Q99574 410 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NPAS2Q99743 824 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SLC25A33Q9BSK2 321 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ANGPTL4Q9BY76 406 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 NPFFR1Q9GZQ6 430 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SLC26A1Q9H2B4 701 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 OSGEPL1Q9H4B0 414 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 EML4Q9HC35 981 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 XAB2Q9HCS7 855 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 ACP6Q9NPH0 428 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 ETNK2Q9NVF9 386 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 PAK5Q9P286 719 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CTSFQ9UBX1 484 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 CD84Q9UIB8 345 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 PSMD13Q9UNM6 376 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 DHDHQ9UQ10 334 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 WDR37Q9Y2I8 494 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TTLL3Q9Y4R7 772 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 TEX264Q9Y6I9 313 aa4.8□□□□□ -1.64
GYPB-212ENST00000511198 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.8□□□□□ -1.64
GYPB-212ENST00000511198 IGHV4-30-2A0A087WSY4 118 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 RBMY1BA6NDE4 496 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 OR6C68A6NDL8 312 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 RBMY1EA6NEQ0 496 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 ARHGAP42A6NI28 874 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 VSTM2BA6NLU5 285 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 PDZK1P1A8MUH7 402 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8SH3BPF8 625 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8RI6L899 631 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ZNF701M0R085 212 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms