RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 TMCO5BA8MYB1 307 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 E9PQ18 207 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 LSM1O15116 133 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 P2RX6O15547 441 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ANGPTL1O95841 491 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 TRBC1P01850 177 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 FTH1P02794 183 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PLEKP08567 350 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 HSMCR30P0CW71 290 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PPIAL4FP0DN26 164 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 MCF2P10911 925 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 MBL2P11226 248 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 POU2F1P14859 743 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ZNF10P21506 573 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 FCGR2CP31995 323 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 OTX1P32242 354 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 RPL9P32969 192 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 NAMPTP43490 491 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 HTR5AP47898 357 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 CSNK1EP49674 416 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 TPMTP51580 245 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SLC8A3P57103 927 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 YWHAGP61981 247 aaKnown RBP eCLIP3.19□□□□□ -1.9
CAST-229ENST00000510098 MS4A2Q01362 244 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 RBBP4Q09028 425 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 BST2Q10589 180 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 MLF2Q15773 248 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 CHRNA6Q15825 494 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 HNRNPA1L2Q32P51 320 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 DMKNQ6E0U4 476 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 ERICH5Q6P6B1 374 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 KCNIP4Q6PIL6 250 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 CCDC80Q76M96 950 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 MICU2Q8IYU8 434 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SLC38A6Q8IZM9 456 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SYCE1Q8N0S2 351 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 MAPK1IP1LQ8NDC0 245 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 FAM83FQ8NEG4 500 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 TRPV1Q8NER1 839 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 OR13F1Q8NGS4 319 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SPPL2AQ8TCT8 520 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 LRRC15Q8TF66 581 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 OR1E3Q8WZA6 343 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ST8SIA1Q92185 356 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 FAM3CQ92520 227 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ITFG2Q969R8 447 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 KIAA1143Q96AT1 154 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 C7orf34Q96L11 122 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 AMDHD1Q96NU7 426 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ERGIC2Q96RQ1 377 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 TGS1Q96RS0 853 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 CCT8L2Q96SF2 557 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 RBM4BQ9BQ04 359 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 DCTN5Q9BTE1 182 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SPATA16Q9BXB7 569 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 UBXN6Q9BZV1 441 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PARLQ9H300 379 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 IL1RL2Q9HB29 575 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 GDF3Q9NR23 364 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 GNG12Q9UBI6 72 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 EMCNQ9ULC0 261 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 FZR1Q9UM11 496 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PPIAL4AQ9Y536 164 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 FKBP7Q9Y680 259 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 FGD5Q6ZNL6 1462 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 IGHV3-38A0A0C4DH36 116 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 A0A1W2PNV4 684 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 TTC26A0AVF1 554 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SH3PXD2BA1X283 911 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SMCO3A2RU48 225 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 TUBAL3A6NHL2 446 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 GABRR3A8MPY1 467 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 H0YL77 283 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PSMD11O00231 422 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SH2D1BO14796 132 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 POLR1CO15160 346 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 ZNF749O43361 778 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 N4BP1O75113 896 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 POP4O95707 220 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 APOA1P02647 267 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 STAG3L2P0CL84 134 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 CD1DP15813 335 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 TNNI1P19237 187 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 SRMP19623 302 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 CYP2B6P20813 491 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PTNP21246 168 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 GLRA1P23415 457 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 CASP14P31944 242 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 RPS5P46782 204 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 SGSHP51688 502 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 PEX3P56589 373 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 MRPS6P82932 125 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 FKBP3Q00688 224 aaKnown RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 KLF5Q13887 457 aaPredicted RBP3.19□□□□□ -1.9
CAST-229ENST00000510098 LY6DQ14210 128 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 ZNF146Q15072 292 aa3.19□□□□□ -1.9
CAST-229ENST00000510098 STK38Q15208 465 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms