RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ZNF717Q9BY31 904 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TSPY26PQ9H489 355 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 METTL7AQ9H8H3 244 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 WDR41Q9HAD4 459 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SMURF2Q9HAU4 748 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 AKIP1Q9NQ31 210 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SERHLQ9NQF3 203 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 PLSCR4Q9NRQ2 329 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GLRX2Q9NS18 164 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 KLHL28Q9NXS3 571 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 NSMCE4AQ9NXX6 385 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ETAA1Q9NY74 926 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 CTNNAL1Q9UBT7 734 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF639Q9UID6 485 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ASB4Q9Y574 426 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SNX8Q9Y5X2 465 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 A0A087X1B8 175 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 A0A096LNT2 108 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 A0A0A6YYD5 115 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SLC22A20A6NK97 555 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 H0YIV9 168 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 FOXE1O00358 373 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 RTCAO00442 366 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PLPP1O14494 284 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 DNALI1O14645 258 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZIC3O60481 467 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 BCAS2O75934 225 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SEMA3DO95025 777 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 INMTO95050 263 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TGM6O95932 706 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ATP1B1P05026 303 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 FESP07332 822 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 NR2F6P10588 404 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PSMB1P20618 241 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 BSGP35613 385 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 CPOXP36551 454 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 GDF5P43026 501 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PPICP45877 212 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 HTR3AP46098 478 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 FNTAP49354 379 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 GAS1P54826 345 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 HNRNPH2P55795 449 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 DSCR4P56555 118 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 LOXL3P58215 753 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 B3GALT5-AS1P59052 145 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TAS2R39P59534 338 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PHEXP78562 749 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 MRPS22P82650 360 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 VLDLRP98155 873 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 HMGCS1Q01581 520 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ID2Q02363 134 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 LOXL1Q08397 574 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 CHIT1Q13231 466 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 VEZF1Q14119 521 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 EFR3AQ14156 821 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TOMM20Q15388 145 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TSNQ15631 228 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 NRF1Q16656 503 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 KRTAP24-1Q3LI83 254 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 C6orf52Q5T4I8 152 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 LIPJQ5W064 366 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 C18orf63Q68DL7 685 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ADNP2Q6IQ32 1131 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 GRHL2Q6ISB3 625 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TTC27Q6P3X3 843 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 CYS1Q717R9 158 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 P4HA3Q7Z4N8 544 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 DTX2Q86UW9 622 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZC3HC1Q86WB0 502 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR4N5Q8IXE1 308 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 GCNT2Q8N0V5 402 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 METTL25Q8N6Q8 603 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 FADS6Q8N9I5 356 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TRIM58Q8NG06 486 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR7G3Q8NG95 312 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR14L1PQ8NHC6 308 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TRPC4APQ8TEL6 797 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ANKRD49Q8WVL7 239 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 IPCEF1Q8WWN9 437 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZBED6CLQ96FA7 236 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 UBXN10Q96LJ8 280 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SFXN2Q96NB2 322 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 FAM111AQ96PZ2 611 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 NODALQ96S42 347 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 NAP1L3Q99457 506 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 HDHD5Q9BXW7 423 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SHCBP1LQ9BZQ2 653 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 NXF5Q9H1B4 397 aaKnown RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SLCO5A1Q9H2Y9 848 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 RHOJQ9H4E5 214 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PLAC1Q9HBJ0 212 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 HHATLQ9HCP6 504 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 SAYSD1Q9NPB0 183 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 YAE1D1Q9NRH1 226 aa3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 PAQR5Q9NXK6 330 aaPredicted RBP3.88□□□□□ -1.79
CALCOCO2-213ENST00000509112 TAS2R10Q9NYW0 307 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms