RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR5M10Q6IEU7 315 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 REEP3Q6NUK4 255 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 FRRS1Q6ZNA5 592 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 PIGWQ7Z7B1 504 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 ZAR1Q86SH2 424 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 SERPINA11Q86U17 422 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 FAM26EQ8N5C1 309 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 ANKFN1Q8N957 763 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 WDR60Q8WVS4 1066 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 TMEM234Q8WY98 164 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 ABTB1Q969K4 478 aaPredicted RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 LRRC58Q96CX6 371 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 HOPXQ9BPY8 73 aaPredicted RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 ECSITQ9BQ95 431 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 CPPED1Q9BRF8 314 aaPredicted RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 LAT2Q9GZY6 243 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 SLC38A1Q9H2H9 487 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 DSN1Q9H410 356 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 BCL2L10Q9HD36 194 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 EXOSC3Q9NQT5 275 aaKnown RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 FBXO34Q9NWN3 711 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 NDE1Q9NXR1 346 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 MED11Q9P086 117 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 SLAMF8Q9P0V8 285 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 FBXL2Q9UKC9 423 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 MYO18BQ8IUG5 2567 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 AHRRA9YTQ3 701 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 NPIPA2E9PIF3 369 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 E9PLN8 166 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 NPIPA3F8WFD2 350 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 FBP2O00757 339 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 FCMRO60667 390 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 DNAJA2O60884 412 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SERPINB7O75635 380 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 AGFG2O95081 481 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CHRM4P08173 479 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CELA3AP09093 270 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 TFPTP0C1Z6 253 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 ARAFP10398 606 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 PEPDP12955 493 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 COX4I1P13073 169 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 PGCP20142 388 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 ELK4P28324 431 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 ADH6P28332 368 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 UQCRFS1P47985 274 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CCR4P51679 360 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 KCNJ10P78508 379 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CHRNEQ04844 493 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SYPL1Q16563 259 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 WIPI1Q5MNZ9 446 aaPredicted RBP8.3□□□□□ -1.08
NUP54-207ENST00000508583 ERICH5Q6P6B1 374 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 APOOLQ6UXV4 268 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 RPTNQ6XPR3 784 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 HACD2Q6Y1H2 254 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CHMP1BQ7LBR1 199 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 YRDCQ86U90 279 aaKnown RBP8.3□□□□□ -1.08
NUP54-207ENST00000508583 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 MSRB3Q8IXL7 192 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 GATSQ8NAP1 163 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 CCDC197Q8NCU1 140 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 HIPK4Q8NE63 616 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 OR5W2Q8NH69 310 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 RASSF5Q8WWW0 418 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SLC35B4Q969S0 331 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 RELTQ969Z4 430 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 TMEM19Q96HH6 336 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SH3YL1Q96HL8 342 aaPredicted RBP8.3□□□□□ -1.08
NUP54-207ENST00000508583 VKORC1Q9BQB6 163 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 MYLK2Q9H1R3 596 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SLC6A15Q9H2J7 730 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 KAT8Q9H7Z6 458 aaKnown RBP8.3□□□□□ -1.08
NUP54-207ENST00000508583 EVA1AQ9H8M9 152 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 SLC13A4Q9UKG4 626 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 L3MBTL1Q9Y468 752 aa8.3□□□□□ -1.08
NUP54-207ENST00000508583 GPC6Q9Y625 555 aaPredicted RBP8.3□□□□□ -1.08
NUP54-207ENST00000508583 DSPPQ9NZW4 1301 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 FREM3P0C091 2139 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 HIVEP3Q5T1R4 2406 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NPIPA5A0A0B4J1W7 369 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 CCL21O00585 134 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 LRRTM2O43300 516 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 CYP7B1O75881 506 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 PGM3O95394 542 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 IFNA14P01570 189 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 UBTFL6P0CB48 400 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 POU3F2P20265 443 aaPredicted RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 RPS4Y1P22090 263 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 FKBP2P26885 142 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 ACVR2AP27037 513 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 NUDT2P50583 147 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 SMSP52788 366 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 MTPNP58546 118 aa8.29□□□□□ -1.08
NUP54-207ENST00000508583 RPS3AP61247 264 aaKnown RBP8.29□□□□□ -1.08
NUP54-207ENST00000508583 HSF1Q00613 529 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms