RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SLC35F3Q8IY50 421 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 MTMR14Q8NCE2 650 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLAIN1Q8ND83 568 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CSNK2A3Q8NEV1 391 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 KLRG1Q96E93 195 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C4orf36Q96KX1 117 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC25A21Q9BQT8 299 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RNF32Q9H0A6 362 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR52A5Q9H2C5 316 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OPA3Q9H6K4 179 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 AKAP12Q02952 1782 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TIAM2Q8IVF5 1701 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3DA0A087WVF3 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3IA0A087WXS9 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3EA0A087X179 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3KA0A087X1G2 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3FA6NER0 549 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3LB9A6J9 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 HCRTR2O43614 444 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF623O75123 536 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 NCR1O76036 304 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ATP1B1P05026 303 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3HP0C7X1 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ELK1P19419 428 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RAB4AP20338 218 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TSPAN31Q12999 210 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CTU2Q2VPK5 515 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR2G6Q5TZ20 316 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TPGS2Q68CL5 300 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3GQ6DHY5 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3CQ6IPX1 549 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBC1D3Q8IZP1 549 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 LRRC25Q8N386 305 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 BPIFB2Q8N4F0 458 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PLPP5Q8NEB5 264 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CRYGNQ8WXF5 182 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ACTRT3Q9BYD9 372 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SAMD10Q9BYL1 202 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ACPTQ9BZG2 426 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 AMBRA1Q9C0C7 1298 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SEC61A2Q9H9S3 476 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC6A20Q9NP91 592 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ENY2Q9NPA8 101 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 NRIP3Q9NQ35 241 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 NDUFB11Q9NX14 153 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CSNK1G3Q9Y6M4 447 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C17orf113A0A1B0GUU1 675 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM129A0AVI4 362 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 AIPO00170 330 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PRDX3P30048 256 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CAV3P56539 151 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TBPL1P62380 186 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 FXNQ16595 210 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PODNL1Q6PEZ8 512 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR6F1Q8NGZ6 308 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR4K13Q8NH42 304 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PHOSPHO1Q8TCT1 267 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TRIB2Q92519 343 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 HOXB13Q92826 284 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 YIPF5Q969M3 257 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF582Q96NG8 517 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 LMF1Q96S06 567 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 DDOQ99489 341 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 GABARAPL3Q9BY60 117 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SPHK1Q9NYA1 384 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 IL20Q9NYY1 176 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RNF215Q9Y6U7 377 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 A0A0A6YYJ9 748 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 TRIM77I1YAP6 450 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 DFFBO76075 338 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ARAFP10398 606 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CALCRP30988 508 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PRKAR1BP31321 381 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 NOVP48745 357 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CAV2P51636 162 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC26A5P58743 744 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 GPR85P60893 370 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PITX1P78337 314 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CTF1Q16619 201 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C18orf21Q32NC0 220 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 NIPAL3Q6P499 406 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C22orf39Q6P5X5 142 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CCDC190Q86UF4 302 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ARL14EPQ8N8R7 260 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR8J2Q8NGG1 315 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 OR56B2PQ8NGI1 322 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF689Q96CS4 500 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 MED18Q9BUE0 208 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC6A17Q9H1V8 727 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C8orf33Q9H7E9 229 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ACKR4Q9NPB9 350 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 ASIC5Q9NY37 505 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CNIH4Q9P003 139 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 PRODH2Q9UF12 536 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms