RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 KCNK6Q9Y257 313 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 WBP11Q9Y2W2 641 aaKnown RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 NDUFAF1Q9Y375 327 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PCYT1BQ9Y5K3 369 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PRSS51A0A1B0GVH4 220 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 H0YJX3 145 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 NR5A2O00482 541 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ANGPT2O15123 496 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CASC3O15234 703 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 PRICKLE3O43900 615 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 MITFO75030 526 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ONECUT2O95948 504 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SERPINA3P01011 423 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 EPORP19235 508 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CMPK1P30085 196 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ACTR1BP42025 376 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 GPR4P46093 362 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 DIO3P55073 304 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 F2RL1P55085 397 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 LGALS3BPQ08380 585 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 MRPL49Q13405 166 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 IL13RA2Q14627 380 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CLCA4Q14CN2 919 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 FAM189A2Q15884 450 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 COL28A1Q2UY09 1125 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 VPS26BQ4G0F5 336 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ATP6AP1LQ52LC2 224 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 XKR6Q5GH73 641 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 FRG2Q64ET8 278 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLC46A3Q7Z3Q1 461 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ZFAND4Q86XD8 727 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ICA1LQ8NDH6 482 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 OR52B6Q8NGF0 335 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 TSACCQ96A04 125 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CMTM7Q96FZ5 175 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 FCRL1Q96LA6 429 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SAMD8Q96LT4 415 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 BTBD9Q96Q07 612 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 FRG2BQ96QU4 278 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SPATA25Q9BR10 227 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 TEX12Q9BXU0 123 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLC6A15Q9H2J7 730 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ELOVL6Q9H5J4 265 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLC52A3Q9NQ40 469 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 HCN3Q9P1Z3 774 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 APOBEC3BQ9UH17 382 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ENPP5Q9UJA9 477 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 RIMS3Q9UJD0 308 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SNX7Q9UNH6 387 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 EIF3LQ9Y262 564 aaKnown RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 PTPRZ1P23471 2315 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM131Q92545 1883 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 LIMS1P48059 325 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 GNG10P50151 68 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CCR8P51685 355 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLC7A2P52569 658 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 P2RX3P56373 397 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SKP1P63208 163 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLAQ13239 276 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 MED21Q13503 144 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 IMPG1Q17R60 797 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SLC5A12Q1EHB4 618 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 HIKESHIQ53FT3 197 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 C6orf10Q5SRN2 563 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 PRMT9Q6P2P2 845 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 C17orf82Q86X59 251 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 LILRA2Q8N149 483 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CATSPER1Q8NEC5 780 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF680Q8NEM1 530 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 WDR20Q8TBZ3 569 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF596Q8TC21 504 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 NAT14Q8WUY8 206 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 RLN3Q8WXF3 142 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 MED8Q96G25 268 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CD180Q99467 661 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ELOVL1Q9BW60 279 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM168Q9H0V1 697 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ATG10Q9H0Y0 220 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 SAP30LQ9HAJ7 183 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 AIG1Q9NVV5 245 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 GID8Q9NWU2 228 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 AHSPQ9NZD4 102 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ABCD2Q9UBJ2 740 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF490Q9ULM2 529 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-206ENST00000507875 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
CLCN3-206ENST00000507875 CFAP54Q96N23 3096 aa6.59□□□□□ -1.36
CLCN3-206ENST00000507875 TRBC2A0A5B9 178 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 LILRA5A6NI73 299 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 DBX1A6NMT0 343 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF716A6NP11 495 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 ZAR1LA6NP61 321 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 LMO7DNF2Z398 122 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 MYO1DO94832 1006 aa6.58□□□□□ -1.36
CLCN3-206ENST00000507875 LGI1O95970 557 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms