RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FARSBQ9NSD9 589 aaKnown RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 VNN3Q9NY84 501 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 GNG12Q9UBI6 72 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ANGPTL2Q9UKU9 493 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 VSIG4Q9Y279 399 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 RALGAPA1Q6GYQ0 2036 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ANKRD30BQ9BXX2 1392 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 IGLV8-61A0A075B6I0 122 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 GSAPA4D1B5 854 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PP2D1A8MPX8 630 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 FCN1O00602 326 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 TBX19O60806 448 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 GPX5O75715 221 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 IDH1O75874 414 aaKnown RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 P0C879 139 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PGCP20142 388 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PTMSP20962 102 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 ATP6V1C1P21283 382 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 HPCAL1P37235 193 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 MRPS11P82912 194 aaKnown RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 RAB40BQ12829 278 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 NDUFA9Q16795 377 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 RNF212Q495C1 297 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PRR30Q53SZ7 412 aaPredicted RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 FAHD2BQ6P2I3 314 aaPredicted RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 FBXO16Q8IX29 292 aaPredicted RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 C11orf42Q8N5U0 333 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PNPT1Q8TCS8 783 aaKnown RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 MYLPFQ96A32 169 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 HAVCR1Q96D42 359 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 FAHD2AQ96GK7 314 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 CELF6Q96J87 481 aaKnown RBP2.51□□□□□ -2.01
LSM6-205ENST00000507449 C12orf66Q96MD2 445 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 KIR2DL4Q99706 377 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 ALG12Q9BV10 488 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 PPDPFQ9H3Y8 114 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 ELOVL3Q9HB03 270 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 RAB18Q9NP72 206 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 SIGLEC8Q9NYZ4 499 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 ZNF221Q9UK13 617 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 CA5BQ9Y2D0 317 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 OR10H1Q9Y4A9 318 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 OARD1Q9Y530 152 aa2.51□□□□□ -2.01
LSM6-205ENST00000507449 FRMPD4Q14CM0 1322 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 A8MUI8 341 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 BTN3A3O00478 584 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 CABYRO75952 493 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 PGK1P00558 417 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 IGHV3-23P01764 117 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 RPA2P15927 270 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 ZP3P21754 424 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 PSMA5P28066 241 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 ADORA2BP29275 332 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 CD80P33681 288 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 RPL29P47914 159 aaKnown RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 ARFIP1P53367 373 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 RPL32P62910 135 aaKnown RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 IGLV3-21P80748 117 aaPredicted RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 RIPPLY1Q0D2K3 151 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 CUL1Q13616 776 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 SYPL1Q16563 259 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 C9orf129Q5T035 196 aaKnown RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 FAM71F2Q6NXP2 309 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 BLOC1S2Q6QNY1 142 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 APTXQ7Z2E3 356 aaKnown RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 C17orf82Q86X59 251 aaPredicted RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 FAM133AQ8N9E0 248 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 OR51G2Q8NGK0 314 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 IL1F10Q8WWZ1 152 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 BADQ92934 168 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 FAF2Q96CS3 445 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 SLC25A38Q96DW6 304 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 TRIM44Q96DX7 344 aaPredicted RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 VPS39Q96JC1 886 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 AMDHD1Q96NU7 426 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 OR5B2Q96R09 309 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 CYP2S1Q96SQ9 504 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 RIT2Q99578 217 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 MCHR1Q99705 422 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 ZNF702PQ9H963 129 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 B3GNT2Q9NY97 397 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 APOBEC3BQ9UH17 382 aaKnown RBP2.5□□□□□ -2.01
LSM6-205ENST00000507449 PPIAL4AQ9Y536 164 aa2.5□□□□□ -2.01
LSM6-205ENST00000507449 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CFAP65Q6ZU64 1925 aaKnown RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 IGLV3-10A0A075B6K4 115 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 G3V4G9 280 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 K7EQM0 130 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 OR7A17O14581 309 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 MSH4O15457 936 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 SPAG6O75602 509 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 IGLL1P15814 213 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 KLK2P20151 261 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CYP2B6P20813 491 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 HNF1AP20823 631 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 OTX2P32243 289 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 IFNAR2P48551 515 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 PPT1P50897 306 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CBX1P83916 185 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms