RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ATRAIDQ6UW56 229 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 NAXDQ8IW45 347 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 CLRN3Q8NCR9 226 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 C7orf57Q8NEG2 295 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 C17orf47Q8NEP4 570 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ZFPM2Q8WW38 1151 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 NPAS1Q99742 590 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ARHGDIGQ99819 225 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 DPH7Q9BTV6 452 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 QRSL1Q9H0R6 528 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 OR10A4Q9H209 315 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 WASH6PQ9NQA3 447 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 FBXL2Q9UKC9 423 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 A0A0G2JPF8 293 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ZC3H12DA2A288 527 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ANXA2P2A6NMY6 339 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 HNRNPCL2B2RXH8 293 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 HNRNPCL3B7ZW38 293 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 FRS3O43559 492 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 MT-ND5P03915 603 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 HNRNPCL4P0DMR1 293 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 EPXP11678 715 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TYRP14679 529 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 S100A11P31949 105 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 VIPR1P32241 457 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 KHKP50053 298 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TMEM115Q12893 351 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 GPR68Q15743 365 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TAF12Q16514 161 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 DECR1Q16698 335 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ACSM3Q53FZ2 586 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 PLBD1Q6P4A8 553 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 GLDNQ6ZMI3 551 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 MEPCEQ7L2J0 689 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 DGLUCYQ7Z3D6 616 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 NKAIN4Q8IVV8 208 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 SLC44A3Q8N4M1 653 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 CHST14Q8NCH0 376 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 OR1S1Q8NH92 325 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ACOT11Q8WXI4 607 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 KLK6Q92876 244 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 F2RL3Q96RI0 385 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TTYH1Q9H313 450 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 PLEKHA1Q9HB21 404 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ZCCHC3Q9NUD5 404 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TEX10Q9NXF1 929 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 KLF15Q9UIH9 416 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ZMIZ1Q9ULJ6 1067 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ABCD4O14678 606 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ASGR2P07307 311 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 IFNGR1P15260 489 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 GJA1P17302 382 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 TRHRP34981 398 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 ERVK-21P61565 698 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 MAPK14Q16539 360 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 OR6V1Q8N148 313 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 BCL7CQ8WUZ0 217 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 GLYATL1Q969I3 302 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 CASD1Q96PB1 797 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 DMRTA2Q96SC8 542 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 SEC22CQ9BRL7 303 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 NDC1Q9BTX1 674 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 GLIPR2Q9H4G4 154 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 LHX9Q9NQ69 397 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 NFKBIL1Q9UBC1 381 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 RCE1Q9Y256 329 aa15.92■□□□□ 0.14
SQSTM1-211ENST00000506690 BRCA2P51587 3418 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 TRAV1-2A0A0B4J238 106 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 MID1O15344 667 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 RP2O75695 350 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 FGBP02675 491 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 GABRA1P14867 456 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 TYRP1P17643 537 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 NDUFV2P19404 249 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 RAD52P43351 418 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 GCGRP47871 477 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 FLI1Q01543 452 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 GRM7Q14831 915 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 MPP7Q5T2T1 576 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 OR5M10Q6IEU7 315 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 NRMQ8IXM6 262 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 KRT78Q8N1N4 520 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 ARL14EPQ8N8R7 260 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 SETD7Q8WTS6 366 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 KAT2AQ92830 837 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 ATOH1Q92858 354 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 KISS1RQ969F8 398 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 SAMD8Q96LT4 415 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 ORAI3Q9BRQ5 295 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 MS4A8Q9BY19 250 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 RHBGQ9H310 441 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 UBQLN3Q9H347 655 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 MTG2Q9H4K7 406 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 INPP5EQ9NRR6 644 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 MRPL15Q9P015 296 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 GPR160Q9UJ42 338 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 FBXL3Q9UKT7 428 aa15.91■□□□□ 0.14
SQSTM1-211ENST00000506690 CXorf51AA0A1B0GTR3 108 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms