RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 EEF1A1P68104 462 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACSM1Q08AH1 577 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 DUSP8Q13202 625 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR1Q1Q15612 314 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 MRPL2Q5T653 305 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ASB18Q6ZVZ8 466 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 MEPCEQ7L2J0 689 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR4N4Q8N0Y3 316 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR51A7Q8NH64 312 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 TMEM239Q8WW34 195 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PTP4A1Q93096 173 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 RNF170Q96K19 258 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 RIPOR3Q96MK2 946 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 HS6ST2Q96MM7 605 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 NECTIN4Q96NY8 510 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 TMEM43Q9BTV4 400 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 IFT27Q9BW83 186 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 KCNN2Q9H2S1 579 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ASB6Q9NWX5 421 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 EXTL2Q9UBQ6 330 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 TRAV27A0A087WT01 109 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 E9PI62 339 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 J3QRE1 110 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PLRG1O43660 514 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 B3GALT2O43825 422 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 KCNJ13O60928 360 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 STX11O75558 287 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 GYPBP06028 91 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 CLUP10909 449 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 CPMP14384 443 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACTR1BP42025 376 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ADPRHP54922 357 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACTR1AP61163 376 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PPP2CBP62714 309 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PPP2CAP67775 309 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC3A1Q07837 685 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SNAP47Q5SQN1 464 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 DCST2Q5T1A1 773 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PRPF38BQ5VTL8 546 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 FAM109BQ6ICB4 259 aaPredicted RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 NIPAL3Q6P499 406 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 ARL9Q6T311 187 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 RPTNQ6XPR3 784 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PRSS41Q7RTY9 318 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 CDK20Q8IZL9 346 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 CYB561A3Q8NBI2 242 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC37A3Q8NCC5 494 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR13C2Q8NGS9 318 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR5W2Q8NH69 310 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 GRHL3Q8TE85 626 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR1E3Q8WZA6 343 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 UPRTQ96BW1 309 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 BPIFA2Q96DR5 249 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR2M4Q96R27 311 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 TIMP4Q99727 224 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 RPP25Q9BUL9 199 aaKnown RBP7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 C1QTNF7Q9BXJ2 289 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SFXN1Q9H9B4 322 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 CLDND1Q9NY35 253 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PHF11Q9UIL8 331 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 KCNE5Q9UJ90 142 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 DAPP1Q9UN19 280 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 POLHQ9Y253 713 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 SCN2AQ99250 2005 aa7.08□□□□□ -1.28
PPARGC1A-204ENST00000506055 PRR23D1E9PI22 279 aaPredicted RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 J3QLW9 94 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 K7EQS6 105 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 BHLHE40O14503 412 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC19A2O60779 497 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 CPNE3O75131 537 aaKnown RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 HLA-DQB1P01920 261 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 POU2F2P09086 479 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 PRR23D2P0DMB1 279 aaPredicted RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZNF19P17023 458 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 NT5EP21589 574 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 HLA-DMAP28067 261 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACVR1BP36896 505 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR10A3P58181 314 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 ADAM15Q13444 863 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 EXOSC7Q15024 291 aaKnown RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 EIPR1Q53HC9 387 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 C1QTNF12Q5T7M4 302 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZC3H14Q6PJT7 736 aaKnown RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 METAP1DQ6UB28 335 aaPredicted RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 THSD4Q6ZMP0 1018 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZNF614Q8N883 585 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 SAMD12Q8N8I0 201 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 COX18Q8N8Q8 333 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 DUSP18Q8NEJ0 188 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 TOR1AIP2Q8NFQ8 470 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR5T3Q8NGG3 340 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 BRIX1Q8TDN6 353 aaKnown RBP7.07□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR2A5Q96R48 311 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms