RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 AMER2Q8N7J2 671 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 CCDC197Q8NCU1 140 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 OR10Q1Q8NGQ4 319 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 OR4C3Q8NH37 302 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 OR5W2Q8NH69 310 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 SLC25A43Q8WUT9 341 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-220ENST00000505005 WNT2BQ93097 391 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 CCDC120Q96HB5 630 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 REXO5Q96IC2 774 aaKnown RBP8.95□□□□□ -0.98
NR1I3-220ENST00000505005 TEX37Q96LM6 180 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 DMRTA2Q96SC8 542 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 EBF4Q9BQW3 602 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 TACO1Q9BSH4 297 aaKnown RBP8.95□□□□□ -0.98
NR1I3-220ENST00000505005 TMEM120AQ9BXJ8 343 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 GALNT9Q9HCQ5 603 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 KCNJ16Q9NPI9 418 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 KLHL28Q9NXS3 571 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 CAMK2AQ9UQM7 478 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 ARL2BPQ9Y2Y0 163 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 PHF3Q92576 2039 aaKnown RBP8.95□□□□□ -0.98
NR1I3-220ENST00000505005 UBR5O95071 2799 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-220ENST00000505005 ZNF407Q9C0G0 2248 aa8.95□□□□□ -0.98
NR1I3-220ENST00000505005 A0A0G2JMM0 328 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 A0A1W2PPB8 328 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 A0A1W2PRS3 328 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 KIR3DP1A8MWS1 328 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 NPIPB9F8W1W9 429 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 H0Y3Z8 333 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 HMGN4O00479 90 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 NR5A2O00482 541 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 FAAHO00519 579 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 KIAA0513O60268 411 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 SEMA7AO75326 666 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 IFNA14P01570 189 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 BMP2P12643 396 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 POU3F2P20265 443 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 EFNA1P20827 205 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 SLC6A2P23975 617 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 APOBEC1P41238 236 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 PCYT1AP49585 367 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 GFRA1P56159 465 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 COPZ1P61923 177 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 KCNJ10P78508 379 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 RGNQ15493 299 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 SGCBQ16585 318 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 LIN52Q52LA3 116 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 EIPR1Q53HC9 387 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 WIPI1Q5MNZ9 446 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 BICRALQ6AI39 1079 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 TNFAIP8L2Q6P589 184 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 YTHDF3Q7Z739 585 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 YRDCQ86U90 279 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 ZNF614Q8N883 585 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 OR5D16Q8NGK9 328 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 LILRB4Q8NHJ6 448 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 RP9Q8TA86 221 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 BBS10Q8TAM1 723 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 CMTM5Q96DZ9 223 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 PSMG3-AS1Q96PY0 264 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 TTYH2Q9BSA4 534 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 UGT2B28Q9BY64 529 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 TMEM38AQ9H6F2 299 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 GP6Q9HCN6 339 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 BCL2L10Q9HD36 194 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 MED11Q9P086 117 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 TINAGQ9UJW2 476 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 SLC13A4Q9UKG4 626 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 MCTS1Q9ULC4 181 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 ZNF175Q9Y473 711 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 PCDHB14Q9Y5E9 798 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 DIDO1Q9BTC0 2240 aaKnown RBP8.94□□□□□ -0.98
NR1I3-220ENST00000505005 HIVEP3Q5T1R4 2406 aa8.94□□□□□ -0.98
NR1I3-220ENST00000505005 EBAG9O00559 213 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 ZIC3O60481 467 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 UGT2B17O75795 530 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SYNGR4O95473 234 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 IGKV1D-16P01601 117 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 ZNF708P17019 499 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 GPX2P18283 190 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 MNAT1P51948 309 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 PMPCAQ10713 525 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SLC25A53Q5H9E4 307 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 FAM219BQ5XKK7 198 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 REEP3Q6NUK4 255 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 ERICH5Q6P6B1 374 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 P4HA3Q7Z4N8 544 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 WDR53Q7Z5U6 358 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-220ENST00000505005 KIF18BQ86Y91 864 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 GRAMD2AQ8IUY3 354 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 CHERPQ8IWX8 916 aaKnown RBP8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SLC43A2Q8N370 569 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 ZNF563Q8TA94 476 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 FBXO30Q8TB52 745 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 WDR60Q8WVS4 1066 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 VPS33AQ96AX1 596 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 ZHX1-C8orf76Q96EF9 292 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 WDYHV1Q96HA8 205 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 THUMPD3Q9BV44 507 aaKnown RBP8.93□□□□□ -0.98
NR1I3-220ENST00000505005 SFXN3Q9BWM7 321 aa8.93□□□□□ -0.98
NR1I3-220ENST00000505005 PRRG4Q9BZD6 226 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms