RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PGGHGQ32M88 737 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CDONQ4KMG0 1287 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 HES5Q5TA89 166 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TRIQKQ629K1 86 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TPRA1Q86W33 373 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 KMT5CQ86Y97 462 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CADM3Q8N126 398 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CACTIN-AS1Q8N1I8 211 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CAMKK1Q8N5S9 505 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CNRIP1Q96F85 164 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ZC3H10Q96K80 434 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 OR2A14Q96R47 310 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 OR2A5Q96R48 311 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GFM1Q96RP9 751 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 LMF2Q9BU23 707 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 AKIP1Q9NQ31 210 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SOHLH2Q9NX45 425 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CMAHPQ9Y471 501 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 DOCK6Q96HP0 2047 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF670-ZNF695F2Z2N8 137 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 NRG2O14511 850 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF749O43361 778 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GCM2O75603 506 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 KLHL18O94889 574 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SMIM10L1P0DMW3 83 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SAGP10523 405 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GABRA5P31644 462 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 OPRL1P41146 370 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PITPNAQ00169 270 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ACSM1Q08AH1 577 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 CCINQ13939 588 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 QPRTQ15274 297 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 BTBD16Q32M84 506 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 FLYWCH1Q4VC44 716 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF770Q6IQ21 691 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ADNP2Q6IQ32 1131 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 MCATQ8IVS2 390 aaKnown RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PM20D2Q8IYS1 436 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM239Q8WW34 195 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SMIM10Q96HG1 83 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PHOX2BQ99453 314 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SSX3Q99909 188 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ERVMER34-1Q9H9K5 563 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 RHCGQ9UBD6 479 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SPIN1Q9Y657 262 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SPTY2D1-AS1A0A0U1RR47 76 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 CPSF4LA6NMK7 179 aaKnown RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 NSA2O95478 260 aaKnown RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PRKAR1AP10644 381 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SRFP11831 508 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PRKCAP17252 672 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GABRB1P18505 474 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 NUDT6P53370 316 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 TPBGQ13641 420 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GPR18Q14330 331 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 PUM1Q14671 1186 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GFOD2Q3B7J2 385 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 XKRXQ6PP77 449 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 KCTD20Q7Z5Y7 419 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 OAFQ86UD1 273 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 POMGNT2Q8NAT1 580 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 GPR32P1Q8NGA4 272 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 LURAP1Q96LR2 239 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 CNPPD1Q9BV87 410 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 JAM3Q9BX67 310 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF350Q9GZX5 532 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SLC38A1Q9H2H9 487 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 KCNK12Q9HB15 430 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 NDUFB11Q9NX14 153 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 IL20Q9NYY1 176 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 USP36Q9P275 1121 aaKnown RBP6.9□□□□□ -1.3
PDGFC-203ENST00000502773 COPZ2Q9P299 210 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 SERTAD3Q9UJW9 196 aa6.9□□□□□ -1.3
PDGFC-203ENST00000502773 A0A1W2PPC4 97 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 DAPL1A0PJW8 107 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 GLOD5A6NK44 160 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 GTPBP1O00178 669 aaKnown RBP6.9□□□□□ -1.31
PDGFC-203ENST00000502773 PHYHO14832 338 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 CASKO14936 926 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 PGRMC2O15173 223 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 ZNF432O94892 652 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 C8orf89P0DMQ9 161 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 CPEP16870 476 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 GABRA3P34903 492 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 ETV6P41212 452 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 SLC15A1P46059 708 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 GBX2P52951 348 aaPredicted RBP6.9□□□□□ -1.31
PDGFC-203ENST00000502773 CHRNEQ04844 493 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 FGL2Q14314 439 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 CYP27C1Q4G0S4 372 aa6.9□□□□□ -1.31
PDGFC-203ENST00000502773 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.31
PDGFC-203ENST00000502773 C9orf50Q5SZB4 431 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms