RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TNFRSF21O75509 655 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 AK1P00568 194 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 PEX19P40855 299 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 RPS3AP61247 264 aaKnown RBP16.56■□□□□ 0.24
HOXD11-202ENST00000498438 TTMPQ5BVD1 217 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 SAXO2Q658L1 398 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 TNFAIP8L2Q6P589 184 aaPredicted RBP16.56■□□□□ 0.24
HOXD11-202ENST00000498438 CBLN3Q6UW01 205 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 OLIG3Q7RTU3 272 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 LUZP2Q86TE4 346 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 TMEM200AQ86VY9 491 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 POC1BQ8TC44 478 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 PIWIL2Q8TC59 973 aaKnown RBP16.56■□□□□ 0.24
HOXD11-202ENST00000498438 MAELQ96JY0 434 aaKnown RBP16.56■□□□□ 0.24
HOXD11-202ENST00000498438 MARK4Q96L34 752 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 ATP6V1G3Q96LB4 118 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 CRIM1Q9NZV1 1036 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 BTNL2Q9UIR0 455 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 CARD8Q9Y2G2 431 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF175Q9Y473 711 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 DTNAQ9Y4J8 743 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 MPDZO75970 2070 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 AKAP9Q99996 3911 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 ENO4A6NNW6 628 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 EIF1AYO14602 144 aaKnown RBP16.55■□□□□ 0.24
HOXD11-202ENST00000498438 TNFSF13O75888 250 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PGRP06401 933 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 LINGO3P0C6S8 592 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 OR12D1P0DN82 309 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 CAPN3P20807 821 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
HOXD11-202ENST00000498438 CHI3L1P36222 383 aaPredicted RBP16.55■□□□□ 0.24
HOXD11-202ENST00000498438 CPA2P48052 419 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PON3Q15166 354 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 GPR68Q15743 365 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 NDUFAF6Q330K2 333 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 ARHGAP11BQ3KRB8 267 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PDZK1Q5T2W1 519 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 OR2A2Q6IF42 318 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 C16orf62Q7Z3J2 963 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 FNDC9Q8TBE3 224 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 ZBTB18Q99592 522 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 SLC35A5Q9BS91 424 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 RBM24Q9BX46 236 aaKnown RBP16.55■□□□□ 0.24
HOXD11-202ENST00000498438 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF350Q9GZX5 532 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PIGMQ9H3S5 423 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 TMEM185BQ9H7F4 350 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 EXD2Q9NVH0 621 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 STOML1Q9UBI4 398 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 PACSIN3Q9UKS6 424 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 ICAM5Q9UMF0 924 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 HEATR5AQ86XA9 2040 aa16.55■□□□□ 0.24
HOXD11-202ENST00000498438 CENPVL1A0A0U1RR11 272 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 GTPBP1O00178 669 aaKnown RBP16.54■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF195O14628 629 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 FCMRO60667 390 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 STX11O75558 287 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 NUDT14O95848 222 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 OPN1LWP04000 364 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 CRHP06850 196 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 IDO1P14902 403 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 EIF1AXP47813 144 aaKnown RBP16.54■□□□□ 0.24
HOXD11-202ENST00000498438 KHKP50053 298 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 P2RX1P51575 399 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 SUMO3P55854 103 aaPredicted RBP16.54■□□□□ 0.24
HOXD11-202ENST00000498438 FOXF1Q12946 379 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 PDCD4Q53EL6 469 aaKnown RBP16.54■□□□□ 0.24
HOXD11-202ENST00000498438 HEPHL1Q6MZM0 1159 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 KIF18BQ86Y91 864 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 CNEP1R1Q8N9A8 125 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 RAB8BQ92930 207 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 ADGRG7Q96K78 797 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 OR52B2Q96RD2 323 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 OR52E6Q96RD3 313 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 INPP5KQ9BT40 448 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 GALNT8Q9NY28 637 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 KCNE5Q9UJ90 142 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 MKLN1Q9UL63 735 aa16.54■□□□□ 0.24
HOXD11-202ENST00000498438 AKAP6Q13023 2319 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 AGR2O95994 175 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 C1QCP02747 245 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 UBL4AP11441 157 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 ME2P23368 584 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 CDKN2CP42773 168 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 RAC1P63000 192 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 EEF1A1P68104 462 aaKnown RBP16.53■□□□□ 0.24
HOXD11-202ENST00000498438 SIRPAP78324 504 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 SORDQ00796 357 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 FUT5Q11128 374 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF141Q15928 474 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 SGCBQ16585 318 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 CTU2Q2VPK5 515 aaKnown RBP16.53■□□□□ 0.24
HOXD11-202ENST00000498438 ATAD3BQ5T9A4 648 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 EEF1A1P5Q5VTE0 462 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 PPP4R4Q6NUP7 873 aa16.53■□□□□ 0.24
HOXD11-202ENST00000498438 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms