RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HYAL4Q2M3T9 481 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 ACSM3Q53FZ2 586 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 ZDHHC20Q5W0Z9 365 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 TMEM17Q86X19 198 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 KCT2Q8NC54 265 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 TRIM36Q9NQ86 728 aa12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 HTTP42858 3142 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 A0A087WUU8 490 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 KCNJ5P48544 419 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 KLF9Q13886 244 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 PUSL1Q8N0Z8 303 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 IL17RCQ8NAC3 791 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 THAP6Q8TBB0 222 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ELP4Q96EB1 424 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ASF1BQ9NVP2 202 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 NTNG1Q9Y2I2 539 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 BACE2Q9Y5Z0 518 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 TBL1XO60907 577 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 PRG2P13727 222 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 DCTDP32321 178 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ADH7P40394 386 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 SNRPEP62304 92 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 C2orf68Q2NKX9 166 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 GRHL2Q6ISB3 625 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 TPGS1Q6ZTW0 290 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 OR4Q3Q8NH05 313 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ABHD4Q8TB40 342 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 TCEAL4Q96EI5 215 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CPNE2Q96FN4 548 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 NPTNQ9Y639 398 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 OR6C68A6NDL8 312 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CDC123O75794 336 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CD160O95971 181 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 UQCRC2P22695 453 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CCDC157Q569K6 752 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 RNF180Q86T96 592 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 MCATQ8IVS2 390 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CCDC36Q8IYA8 594 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF285Q96NJ3 590 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 TMEM231Q9H6L2 316 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 CHD5Q8TDI0 1954 aa12.2□□□□□ -0.46
GAPVD1-220ENST00000497580 ANTXRLA6NF34 631 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 GNB5O14775 395 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 TXNL1O43396 289 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 RB1P06400 928 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 ATP5C1P36542 298 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 RNF144AP50876 292 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 MMP15P51511 669 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 GMFBP60983 142 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 RPE65Q16518 533 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 NDUFA9Q16795 377 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 PRSS55Q6UWB4 352 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF704Q6ZNC4 412 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF485Q8NCK3 441 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SCAMP4Q969E2 229 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF471Q9BX82 626 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SLC25A18Q9H1K4 315 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 EMC3Q9P0I2 261 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 STOX2Q9P2F5 926 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 AKR7A3O95154 331 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 KLKB1P03952 638 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SLC9B2Q86UD5 537 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 LDLRAD3Q86YD5 345 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SCLYQ96I15 445 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 C4orf36Q96KX1 117 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 C7orf50Q9BRJ6 194 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 TAAR2Q9P1P5 351 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 H3BSH0 61 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 M0QZQ0 153 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SERPIND1P05546 499 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 ACAA1P09110 424 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 RPL3P39023 403 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 PRR5P85299 388 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SMAD2Q15796 467 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 DCAF12L2Q5VW00 463 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 SPAG16Q8N0X2 631 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 C1orf216Q8TAB5 229 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
GAPVD1-220ENST00000497580 TCEAL3Q969E4 200 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms