RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SPRY3O43610 288 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 KDELR3O43731 214 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 EFNA2O43921 213 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 CBR3O75828 277 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 FGF19O95750 216 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 GAPDHP04406 335 aaKnown RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 UMODP07911 640 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 LINC00271P0C7V0 271 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 AOC1P19801 751 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF10P21506 573 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 CDH5P33151 784 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 SPAM1P38567 509 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 GYG1P46976 350 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 PGFP49763 221 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 DUSP3P51452 185 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 NOVA1P51513 510 aaKnown RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ACLYP53396 1101 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 RAG2P55895 527 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 BACE1P56817 501 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 PHEXP78562 749 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 TRAF3Q13114 568 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 RCAN2Q14206 197 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 GPR176Q14439 515 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 DUSP5Q16690 384 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 HAGHQ16775 308 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ACCSLQ4AC99 568 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 FAM74A3Q4VXF1 159 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 TCHHL1Q5QJ38 904 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 BEND6Q5SZJ8 279 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 OLFML1Q6UWY5 402 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 COLCA1Q6ZS62 124 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 LANCL3Q6ZV70 420 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 TRIM69Q86WT6 500 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 DNAJC22Q8N4W6 341 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 FAM86B1Q8N7N1 296 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 PROKR2Q8NFJ6 384 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ACMSDQ8TDX5 336 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 CCDC12Q8WUD4 166 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 C18orf25Q96B23 403 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 LURAP1Q96LR2 239 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 SLC38A3Q99624 504 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ACBD6Q9BR61 282 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 TMEM175Q9BSA9 504 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 FRMD8P1Q9BZ68 369 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 EBF3Q9H4W6 596 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 NT5MQ9NPB1 228 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 SLC17A5Q9NRA2 495 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF224Q9NZL3 707 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 C19orf25Q9UFG5 118 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ELF5Q9UKW6 265 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-224ENST00000497488 KCNS2Q9ULS6 477 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 STAP1Q9ULZ2 295 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 KIF20BQ96Q89 1820 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 ABCC6O95255 1503 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 DISP2A7MBM2 1401 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 LMO7DNF2Z398 122 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 K7ESM1 405 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 NR5A2O00482 541 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 TAPBPO15533 448 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 RGS14O43566 566 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 FGF5P12034 268 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 CA6P23280 308 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 EPHA2P29317 976 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 BTG1P62324 171 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 DGCR2P98153 550 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 OC90Q02509 493 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 CCDC173Q0VFZ6 552 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 KNOP1Q1ED39 458 aaKnown RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 HECTD2Q5U5R9 776 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 TWF2Q6IBS0 349 aaKnown RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 LRRC49Q8IUZ0 686 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 NKAIN4Q8IVV8 208 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 FAM89BQ8N5H3 189 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 SLC37A3Q8NCC5 494 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 OR4A15Q8NGL6 344 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 ANGPTL6Q8NI99 470 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 ASB9Q96DX5 294 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 RTP4Q96DX8 246 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 CAPNS2Q96L46 248 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 NSMCE3Q96MG7 304 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF578Q96N58 590 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 IL12RB2Q99665 862 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 DUSP26Q9BV47 211 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 BBS2Q9BXC9 721 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 CSTL1Q9H114 145 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 OR2AG1Q9H205 316 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 GAL3ST2Q9H3Q3 398 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 PXMP2Q9NR77 195 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 IL36GQ9NZH8 169 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 TUBGCP4Q9UGJ1 667 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 PURGQ9UJV8 347 aaKnown RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 EIF3LQ9Y262 564 aaKnown RBP5.33□□□□□ -1.56
BRCA1-224ENST00000497488 PEAK1Q9H792 1746 aa5.33□□□□□ -1.56
BRCA1-224ENST00000497488 WNK3Q9BYP7 1800 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 RPAP1Q9BWH6 1393 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 PARP4Q9UKK3 1724 aaKnown RBP5.32□□□□□ -1.56
BRCA1-224ENST00000497488 A0A087WZ39 114 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 SNURFLB1AK76 121 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 ANHXE9PGG2 379 aa5.32□□□□□ -1.56
BRCA1-224ENST00000497488 CASKO14936 926 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms