RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 H0Y3Z8 333 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 UPK1AO00322 258 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PLOD2O00469 737 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CXCR6O00574 342 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CASQ2O14958 399 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 NVLO15381 856 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FGF17O60258 216 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CTNSO60931 367 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ERAL1O75616 437 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CREG1O75629 220 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 KRT75O95678 551 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 LDOC1O95751 146 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 GPIP06744 558 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SLC35E2P0CK97 266 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 C8orf89P0DMQ9 161 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 UMPSP11172 480 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RNH1P13489 461 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ETFAP13804 333 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CPMP14384 443 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FPR3P25089 353 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 NTSP30990 170 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TLX1P31314 330 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 MPIP34949 423 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PCGF2P35227 344 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FEN1P39748 380 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CCT3P49368 545 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 XKP51811 444 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 NCBP2P52298 156 aaKnown RBP eCLIP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PDX1P52945 283 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 POLE2P56282 527 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 AP2B1P63010 937 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 MRPS22P82650 360 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SHC2P98077 582 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 MAT1AQ00266 395 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ACY1Q03154 408 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SLC34A1Q06495 639 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RBBP4Q09028 425 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 HSPB3Q12988 150 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TRA2AQ13595 282 aaKnown RBP eCLIP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 VEZF1Q14119 521 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RCN1Q15293 331 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SF3A2Q15428 464 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TRIP6Q15654 476 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SYT16Q17RD7 645 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 AASDHQ4L235 1098 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ZNF628Q5EBL2 1059 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RNASE12Q5GAN4 147 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 KHDC1LQ5JSQ8 128 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FHL5Q5TD97 284 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ZFP1Q6P2D0 407 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ERICH5Q6P6B1 374 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 DGAT2L6Q6ZPD8 337 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CCDC80Q76M96 950 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 C6orf120Q7Z4R8 191 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SPATA24Q86W54 205 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RNF130Q86XS8 419 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 OR4N5Q8IXE1 308 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SAMD14Q8IZD0 417 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 OR2L13Q8N349 312 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 HORMAD2Q8N7B1 307 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FAM86B1Q8N7N1 296 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 BMPERQ8N8U9 685 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TTC29Q8NA56 475 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TNIP2Q8NFZ5 429 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 OR4K14Q8NGD5 310 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 OR5AK3PQ8NH89 298 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FAM110BQ8TC76 370 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PNPT1Q8TCS8 783 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SFXN5Q8TD22 340 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SLC26A7Q8TE54 656 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ADAMTS18Q8TE60 1221 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PYDC1Q8WXC3 89 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 STMN2Q93045 179 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TBC1D20Q96BZ9 403 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CTHRC1Q96CG8 243 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ELP4Q96EB1 424 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 GIMAP5Q96F15 307 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CNDP2Q96KP4 475 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 MOGAT1Q96PD6 335 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 BBS4Q96RK4 519 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 MESP1Q9BRJ9 268 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RSPO3Q9BXY4 272 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 TMEM38AQ9H6F2 299 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SLC22A11Q9NSA0 550 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 FGF21Q9NSA1 209 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 DCAF13Q9NV06 445 aaKnown RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 OLAHQ9NV23 265 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 ZNF639Q9UID6 485 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RIMS3Q9UJD0 308 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 PSME2Q9UL46 239 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 RAB23Q9ULC3 237 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 CORO2BQ9UQ03 480 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 NUP214P35658 2090 aaPredicted RBP4.95□□□□□ -1.62
GGPS1-208ENST00000497327 UNC13CQ8NB66 2214 aa4.95□□□□□ -1.62
GGPS1-208ENST00000497327 SPTBP11277 2137 aa4.94□□□□□ -1.62
GGPS1-208ENST00000497327 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
GGPS1-208ENST00000497327 A0A0C4DFX4 3053 aa4.94□□□□□ -1.62
GGPS1-208ENST00000497327 SEC16AO15027 2179 aa4.94□□□□□ -1.62
GGPS1-208ENST00000497327 IGLV3-12A0A075B6K2 115 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms