RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 POU5F2Q8N7G0 328 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 OR5M1Q8NGP8 315 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 PMM1Q92871 262 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 LRRC58Q96CX6 371 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 WDYHV1Q96HA8 205 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 SFXN2Q96NB2 322 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 CCT8L2Q96SF2 557 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 THUMPD3Q9BV44 507 aaKnown RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 PRDM14Q9GZV8 571 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 TP63Q9H3D4 680 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ALKBH4Q9NXW9 302 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 VDAC3Q9Y277 283 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 MEMO1Q9Y316 297 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 DSPPQ9NZW4 1301 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 GTF3C1Q12789 2109 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 A0A087WZY1 265 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 A0A0G2JPF8 293 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 WIPF3A6NGB9 483 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 CLDN24A6NM45 220 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 HNRNPCL2B2RXH8 293 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 HNRNPCL3B7ZW38 293 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 SHISA8B8ZZ34 492 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 E9PLN8 166 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 FXYD1O00168 92 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 HNRNPCL1O60812 293 aaKnown RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 BCAS1O75363 584 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 CSTAP01040 98 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 LDLRP01130 860 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 NPPAP01160 153 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 RNF224P0DH78 156 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 HNRNPCL4P0DMR1 293 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 ARAFP10398 606 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 UBL4AP11441 157 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 ESRRAP11474 423 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 COX4I1P13073 169 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 RPS4Y1P22090 263 aaKnown RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 CHMP24386 653 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 GCKP35557 465 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 PLAURQ03405 335 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 SKP2Q13309 424 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 GNA13Q14344 377 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 ADRM1Q16186 407 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 TMEM44Q2T9K0 475 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 RAET1LQ5VY80 246 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 NANOGP8Q6NSW7 305 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 AAGABQ6PD74 315 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 NCCRP1Q6ZVX7 275 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 EIF3MQ7L2H7 374 aaKnown RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 RPRMLQ8N4K4 120 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 CCDC120Q96HB5 630 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 DMRTA2Q96SC8 542 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 NPAS1Q99742 590 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 TREX2Q9BQ50 279 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 VKORC1Q9BQB6 163 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 PIGQQ9BRB3 760 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 SLC39A3Q9BRY0 314 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 TMEM38AQ9H6F2 299 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 KAT8Q9H7Z6 458 aaKnown RBP12.26□□□□□ -0.45
COL1A1-208ENST00000494334 NANOGQ9H9S0 305 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 BCL2L10Q9HD36 194 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 SLC35A3Q9Y2D2 325 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 ARL2BPQ9Y2Y0 163 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF337Q9Y3M9 751 aa12.26□□□□□ -0.45
COL1A1-208ENST00000494334 FREM3P0C091 2139 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 HIVEP3Q5T1R4 2406 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 OR2M5A3KFT3 312 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 FIGNL2A6NMB9 653 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 SHOX2O60902 331 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 WDR1O75083 606 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 CYP7B1O75881 506 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PGM3O95394 542 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 DBIP07108 87 aaKnown RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 LINGO3P0C6S8 592 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 UBTFL6P0CB48 400 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 GABRA1P14867 456 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 IL7RP16871 459 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ACVR2AP27037 513 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 LHX2P50458 406 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 SUMO3P55854 103 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 CDK6Q00534 326 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 TOMM34Q15785 309 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PLPPR5Q32ZL2 321 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PRAMEF8Q5VWM4 474 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PRAMEF7Q5VXH5 474 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 RTL6Q6ICC9 239 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ENPP6Q6UWR7 440 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 VRK2Q86Y07 508 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PEX5LQ8IYB4 626 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PM20D2Q8IYS1 436 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ULK2Q8IYT8 1036 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 EID3Q8N140 333 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 METTL25Q8N6Q8 603 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PCYOX1LQ8NBM8 494 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 FAM71CQ8NEG0 241 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms