RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 ACSL3O95573 720 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 LDLRP01130 860 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SHBGP04278 402 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 EIF2S1P05198 315 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RAB40ALP0C0E4 278 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RHOXF2BP0C7M4 288 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SMIM10L1P0DMW3 83 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 COX6A1P12074 109 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 NCF1P14598 390 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 MAOAP21397 527 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PPP2R1BP30154 601 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RPA3P35244 121 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 GP5P40197 560 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 COMPP49747 757 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 NR0B1P51843 470 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RPS3AP61247 264 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SARNPP82979 210 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 MC1RQ01726 317 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PLOD1Q02809 727 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 EEF1A2Q05639 463 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PRDX1Q06830 199 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 KLC1Q07866 573 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ARHGAP19Q14CB8 494 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TGFBIQ15582 683 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 EFNB3Q15768 340 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TBCEQ15813 527 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 C2orf68Q2NKX9 166 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ZNF585BQ52M93 769 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TECRLQ5HYJ1 363 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 FAM122CQ6P4D5 195 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 QSOX2Q6ZRP7 698 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PCGF5Q86SE9 256 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TMPRSS11BQ86T26 416 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SYVN1Q86TM6 617 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SLC26A11Q86WA9 606 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TICAM1Q8IUC6 712 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 APLFQ8IW19 511 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 CSNK1A1LQ8N752 337 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 OR4K1Q8NGD4 311 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 OR2Y1Q8NGV0 311 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 MAGEC3Q8TD91 643 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SMPDL3AQ92484 453 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RHBDF1Q96CC6 855 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SMIM10Q96HG1 83 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 HARBI1Q96MB7 349 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RUNDC3BQ96NL0 473 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 CSF3RQ99062 836 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RHOXF2Q9BQY4 288 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RAB11FIP5Q9BXF6 653 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ZNF717Q9BY31 904 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 NLNQ9BYT8 704 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 DERL2Q9GZP9 239 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SLC26A1Q9H2B4 701 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ALG9Q9H6U8 611 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PARVBQ9HBI1 364 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PPANQ9NQ55 473 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 CCDC177Q9NQR7 707 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 TAS2R13Q9NYV9 303 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 RNF14Q9UBS8 474 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ZNF225Q9UK10 706 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 ZNF223Q9UK11 482 aaPredicted RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 FBXL4Q9UKA2 621 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 EMCNQ9ULC0 261 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PADI1Q9ULC6 663 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 SLC22A14Q9Y267 594 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 FARSAQ9Y285 508 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 PTRH2Q9Y3E5 179 aaKnown RBP4.47□□□□□ -1.69
CCNB3-208ENST00000493507 OARD1Q9Y530 152 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 MED12Q93074 2177 aa4.47□□□□□ -1.69
CCNB3-208ENST00000493507 CACNA1CQ13936 2221 aa4.46□□□□□ -1.69
CCNB3-208ENST00000493507 ZNF407Q9C0G0 2248 aa4.46□□□□□ -1.69
CCNB3-208ENST00000493507 A0A1W2PQ72 361 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 A6NL46 340 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 RTCAO00442 366 aaKnown RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 E2F3O00716 465 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SLC16A5O15375 505 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 ZNHIT1O43257 154 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 PRKNO60260 465 aaPredicted RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 NDUFS7O75251 213 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SH3BGRLO75368 114 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 C8GP07360 202 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 CCDC166P0CW27 439 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 EZRP15311 586 aaKnown RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 ZNF182P17025 639 aaPredicted RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 CMPK1P30085 196 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SLC26A3P40879 764 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 CSTF3Q12996 717 aaKnown RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 MYBPHQ13203 477 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SLMAPQ14BN4 828 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 TTLL9Q3SXZ7 439 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 TCHHL1Q5QJ38 904 aaPredicted RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 MLIPQ5VWP3 458 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 CES4AQ5XG92 561 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 C3orf62Q6ZUJ4 267 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 SH2D5Q6ZV89 423 aa4.46□□□□□ -1.7
CCNB3-208ENST00000493507 TAOK1Q7L7X3 1001 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms