RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MAOBP27338 520 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 RCVRNP35243 200 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 HCCSP53701 268 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 EIF2B5Q13144 721 aaKnown RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 FZD5Q13467 585 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 PRICKLE4Q2TBC4 344 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 USP53Q70EK8 1073 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 TRIM69Q86WT6 500 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 MARCH9Q86YJ5 346 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 OR2T33Q8NG76 320 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 BAHD1Q8TBE0 780 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 SP140LQ9H930 580 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 MEPEQ9NQ76 525 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 PCOLCE2Q9UKZ9 415 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 C19orf53Q9UNZ5 99 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CMAHPQ9Y471 501 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CDH10Q9Y6N8 788 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 C2CD4DB7Z1M9 353 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IGKV1D-16P01601 117 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 NGFRP08138 427 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 THEGLP0DJG4 465 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 AKT2P31751 481 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IFNA8P32881 189 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IFNGR2P38484 337 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 RFX2P48378 723 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 HHEXQ03014 270 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 P2RY14Q15391 338 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 DECR1Q16698 335 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 KLHL22Q53GT1 634 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 TUBA3EQ6PEY2 450 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 AKAP14Q86UN6 197 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF619Q8N2I2 560 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 ARL14Q8N4G2 192 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 GATSQ8NAP1 163 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 MINDY2Q8NBR6 621 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 ATP6V1C2Q8NEY4 427 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 TMEM239Q8WW34 195 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CLIP3Q96DZ5 547 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 KCTD7Q96MP8 289 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 BEX2Q9BXY8 128 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 PIGUQ9H490 435 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 SIAEQ9HAT2 523 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CACYBPQ9HB71 228 aaKnown RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 SIDT1Q9NXL6 827 aaKnown RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 WSB2Q9NYS7 404 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CRNNQ9UBG3 495 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 ISPDA4D126 451 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 E9PI62 339 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 OR10H2O60403 315 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 GALR3O60755 368 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 STX11O75558 287 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 APBB3O95704 486 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CBX7O95931 251 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PTTG1O95997 202 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 APEX1P27695 318 aaKnown RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PGDP52209 483 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 BTG2P78543 158 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 MGAT2Q10469 447 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 KCNJ8Q15842 424 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CADM2Q8N3J6 435 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 OR10H4Q8NGA5 316 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 OSTF1Q92882 214 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 SPACA7Q96KW9 195 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ARHGAP9Q9BRR9 750 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF649Q9BS31 505 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 SRRQ9GZT4 340 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CPNE5Q9HCH3 593 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 A0A075B6Q4 140 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CDHR4A6H8M9 788 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 UNC119BA6NIH7 251 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 SLC9B1P1A6NJY1 282 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 SHISA7A6NL88 538 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 C2orf74A8MZ97 194 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 SLC30A4O14863 429 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 HPGDSO60760 199 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 TMCC2O75069 709 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 OR5F1O95221 314 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 GPR75O95800 540 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 NID1P14543 1247 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CASP3P42574 277 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 CDC20Q12834 499 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PLK5Q496M5 336 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ARMC4Q5T2S8 1044 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PRAMEF8Q5VWM4 474 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PRAMEF7Q5VXH5 474 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 RANBP3LQ86VV4 465 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 LINC00471Q8N535 108 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF485Q8NCK3 441 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ANKRD9Q96BM1 317 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 ABHD8Q96I13 439 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 FN3KQ9H479 309 aa11.53□□□□□ -0.56
HMGN1-220ENST00000492280 FGF20Q9NP95 211 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-220ENST00000492280 FLRT3Q9NZU0 649 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms