RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 DGAT2L6Q6ZPD8 337 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ADCK1Q86TW2 530 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 IGFN1Q86VF2 1251 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ZNF761Q86XN6 746 aaPredicted RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 LNX2Q8N448 690 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ZNF615Q8N8J6 731 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ZNF485Q8NCK3 441 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ANKK1Q8NFD2 765 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 OR52R1Q8NGF1 315 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 GPR151Q8TDV0 419 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 PIK3R3Q92569 461 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 RIT1Q92963 219 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 RBM18Q96H35 190 aaKnown RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 FAM46AQ96IP4 442 aaKnown RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 OR1F2PQ96R84 312 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 G6PC3Q9BUM1 346 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 CDADC1Q9BWV3 514 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 TPSD1Q9BZJ3 242 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 TRIM2Q9C040 744 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 DUSP15Q9H1R2 295 aaPredicted RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 PDE7BQ9NP56 450 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 PRTFDC1Q9NRG1 225 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 FBXO34Q9NWN3 711 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 BAIAP2Q9UQB8 552 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 CFL2Q9Y281 166 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 UGT2A1Q9Y4X1 527 aa9.94□□□□□ -0.82
USP4-214ENST00000491791 MAP1BP46821 2468 aaKnown RBP9.94□□□□□ -0.82
USP4-214ENST00000491791 MN1Q10571 1320 aaPredicted RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 A0A0A6YYC8 382 aaPredicted RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 A0A0B4J2E0 115 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 A0A1B0GX12 115 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 GXYLT2A0PJZ3 443 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 EFCAB7A8K855 629 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 I3L1I5 382 aaPredicted RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 J3QRE1 110 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 BHLHE40O14503 412 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 DSCR3O14972 297 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CHP2O43745 196 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 NUDT21O43809 227 aaKnown RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 OR10H2O60403 315 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 PTP4A3O75365 173 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 PIAS2O75928 621 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 IGHA1P01876 353 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CTSBP07858 339 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 HBQ1P09105 142 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CT45A8P0DMV1 189 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CT45A9P0DMV2 189 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CPEP16870 476 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 ACAA2P42765 397 aaKnown RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 MTNR1AP48039 350 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 PPP5CP53041 499 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 COPZ1P61923 177 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 SQSTM1Q13501 440 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 C1DQ13901 141 aaKnown RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 FGFBP1Q14512 234 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 EXOSC7Q15024 291 aaKnown RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 CT45A2Q5DJT8 189 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 ZNF550Q7Z398 422 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 KMT5CQ86Y97 462 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 IQCF1Q8N6M8 205 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 OR2T33Q8NG76 320 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 OR4Q3Q8NH05 313 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 TMEM239Q8WW34 195 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 COX4I2Q96KJ9 171 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 LRFN5Q96NI6 719 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 MROQ9BYG7 248 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 HOXD1Q9GZZ0 328 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 ARRDC1-AS1Q9H2J1 176 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 DSN1Q9H410 356 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 EGLN3Q9H6Z9 239 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 TMEM27Q9HBJ8 222 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 STARD5Q9NSY2 213 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 SIDT1Q9NXL6 827 aaKnown RBP9.93□□□□□ -0.82
USP4-214ENST00000491791 SLC7A7Q9UM01 511 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 CLCA2Q9UQC9 943 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 PCDHGA5Q9Y5G8 931 aa9.93□□□□□ -0.82
USP4-214ENST00000491791 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 UNC119BA6NIH7 251 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SAGE2PA6NJ88 616 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PEX12O00623 359 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 GDF9O60383 454 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 GPX5O75715 221 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 RCBTB2O95199 551 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SNX4O95219 450 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CLPSP04118 112 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZNF806P0C7X5 589 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 BMP4P12644 408 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PRG2P13727 222 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 GNSP15586 552 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 TBXA2RP21731 343 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 GALP22466 123 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PSMA1P25786 263 aaKnown RBP9.92□□□□□ -0.82
USP4-214ENST00000491791 HTR1FP30939 366 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CRYBB2P43320 205 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ATP12AP54707 1039 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 WNT4P56705 351 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms