RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SEMA3GQ9NS98 782 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 RPL36Q9Y3U8 105 aaKnown RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 C9orf172C9J069 976 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 CYR61O00622 381 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 IGFBP1P08833 259 aaPredicted RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 RORAP35398 523 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 SOX3P41225 446 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 SPHARQ15513 63 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 VANGL1Q8TAA9 524 aaPredicted RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 RASSF5Q8WWW0 418 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 MVB12AQ96EY5 273 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 ZNF607Q96SK3 696 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 SLC7A5P2Q9GIP4 190 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 POLR2J3Q9H1A7 115 aaKnown RBP21.1■□□□□ 0.97
USF3-203ENST00000491165 CLEC2DQ9UHP7 191 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 SRPK3Q9UPE1 567 aa21.1■□□□□ 0.97
USF3-203ENST00000491165 H0YIG0 161 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 HMGN4O00479 90 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 CDC123O75794 336 aaPredicted RBP21.09■□□□□ 0.97
USF3-203ENST00000491165 AVPR1BP47901 424 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 KCNJ5P48544 419 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 TRA2BP62995 288 aaKnown RBP21.09■□□□□ 0.97
USF3-203ENST00000491165 TNFRSF17Q02223 184 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 COX15Q7KZN9 410 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 BPHLQ86WA6 291 aaPredicted RBP21.09■□□□□ 0.97
USF3-203ENST00000491165 RSPO3Q9BXY4 272 aaPredicted RBP21.09■□□□□ 0.97
USF3-203ENST00000491165 LYRM4Q9HD34 91 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 ERVK13-1Q9NX77 482 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 SEC14L4Q9UDX3 406 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 TRAPPC4Q9Y296 219 aa21.09■□□□□ 0.97
USF3-203ENST00000491165 SLITRK5O94991 958 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 PSMA1P25786 263 aaKnown RBP21.08■□□□□ 0.97
USF3-203ENST00000491165 TNFSF8P32971 234 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 SMIM11AP58511 58 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 ZNF91Q05481 1191 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 YOD1Q5VVQ6 348 aaPredicted RBP21.08■□□□□ 0.97
USF3-203ENST00000491165 PGBD2Q6P3X8 592 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 OR8J1Q8NGP2 316 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 OR51Q1Q8NH59 317 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 ULBP3Q9BZM4 244 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 SIRT3Q9NTG7 399 aaPredicted RBP21.08■□□□□ 0.97
USF3-203ENST00000491165 C14orf119Q9NWQ9 140 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 LYARQ9NX58 379 aaKnown RBP21.08■□□□□ 0.97
USF3-203ENST00000491165 FOXJ2Q9P0K8 574 aa21.08■□□□□ 0.97
USF3-203ENST00000491165 CPN2P22792 545 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 RPS19P39019 145 aaKnown RBP21.08■□□□□ 0.96
USF3-203ENST00000491165 EFNA3P52797 238 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 PCBP4P57723 403 aaKnown RBP21.08■□□□□ 0.96
USF3-203ENST00000491165 EIF3IQ13347 325 aaKnown RBP21.08■□□□□ 0.96
USF3-203ENST00000491165 DCAF12Q5T6F0 453 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 MFSD4BQ5TF39 518 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 RBM45Q8IUH3 476 aaKnown RBP21.08■□□□□ 0.96
USF3-203ENST00000491165 HOXD1Q9GZZ0 328 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 ZNF304Q9HCX3 659 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 SEC14L3Q9UDX4 400 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 ACAD8Q9UKU7 415 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 CES1P1Q9UKY3 287 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 LOC400499M0QZD8 3231 aa21.08■□□□□ 0.96
USF3-203ENST00000491165 AHCTF1Q8WYP5 2266 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 NINQ8N4C6 2090 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 FRKP42685 505 aaPredicted RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 ZNF750Q32MQ0 723 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 CELF2-AS1Q8N7Q2 184 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 IL17RDQ8NFM7 739 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 EXOSC8Q96B26 276 aaKnown RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 TSSK6Q9BXA6 273 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 CTSFQ9UBX1 484 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 STUB1Q9UNE7 303 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 B4GALT2O60909 372 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 CPNE3O75131 537 aaKnown RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 RORCP51449 518 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 RAB38P57729 211 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 DSG2Q14126 1118 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 VWA2Q5GFL6 755 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 RNLSQ5VYX0 342 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 FAM199XQ6PEV8 388 aaPredicted RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 TMPRSS7Q7RTY8 843 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 OR8H2Q8N162 312 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 TCEANCQ8N8B7 351 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 OR4D11Q8NGI4 311 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 COL26A1Q96A83 441 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 TMCO6Q96DC7 493 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 ZBED6CLQ96FA7 236 aaPredicted RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 TAAR9Q96RI9 348 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 SIAEQ9HAT2 523 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 MOV10Q9HCE1 1003 aaKnown RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 NDUFB11Q9NX14 153 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 RBMX2Q9Y388 322 aaKnown RBP21.07■□□□□ 0.96
USF3-203ENST00000491165 NUP210LQ5VU65 1888 aa21.07■□□□□ 0.96
USF3-203ENST00000491165 MEN1O00255 615 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 RGS5O15539 181 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 SLC28A2O43868 658 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 LDB3O75112 727 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 UGT2B17O75795 530 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 NR2F6P10588 404 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 CRYBB2P43320 205 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 DUSP2Q05923 314 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 C1DQ13901 141 aaKnown RBP21.06■□□□□ 0.96
USF3-203ENST00000491165 OCLNQ16625 522 aa21.06■□□□□ 0.96
USF3-203ENST00000491165 CCDC92Q53HC0 331 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms