RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ATP6V1HQ9UI12 483 aa17.66■□□□□ 0.42
SREBF1-216ENST00000490796 GTPBP1O00178 669 aaKnown RBP17.65■□□□□ 0.42
SREBF1-216ENST00000490796 ADAMDEC1O15204 470 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 TUBBP07437 444 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 SFTPDP35247 375 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 TP53BP2Q13625 1128 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 LSM12Q3MHD2 195 aaKnown RBP17.65■□□□□ 0.42
SREBF1-216ENST00000490796 PLEKHM3Q6ZWE6 761 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
SREBF1-216ENST00000490796 TRABD2AQ86V40 505 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 KRTAP1-3Q8IUG1 177 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 NATD1Q8N6N6 113 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 BANPQ8N9N5 519 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 OR7A2PQ8NGA2 310 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 OR56A1Q8NGH5 318 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 OR5P2Q8WZ92 322 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 ADGRG7Q96K78 797 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 HS3ST6Q96QI5 342 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 ACTRT3Q9BYD9 372 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 C12orf49Q9H741 205 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 MKS1Q9NXB0 559 aa17.65■□□□□ 0.42
SREBF1-216ENST00000490796 DSCAMO60469 2012 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 A0A0J9YW62 118 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 GJE1A6NN92 205 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 CFLARO15519 480 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 LYPLA1O75608 230 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 SOX30O94993 753 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 IL11P20809 199 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 CCT3P49368 545 aaKnown RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 NR1H2P55055 460 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 CD226Q15762 336 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 CTU2Q2VPK5 515 aaKnown RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 TMEM201Q5SNT2 666 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 ALKBH2Q6NS38 261 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 CDC73Q6P1J9 531 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 YTHDF3Q7Z739 585 aaKnown RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 WFDC8Q8IUA0 241 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 ZNF614Q8N883 585 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 FNDC5Q8NAU1 212 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 OR2W6PQ8NHA6 318 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 Q96MF0 132 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 NPAS1Q99742 590 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 BDH2Q9BUT1 245 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 C1orf50Q9BV19 199 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 MECRQ9BV79 373 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 SIRT3Q9NTG7 399 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-216ENST00000490796 GIMAP2Q9UG22 337 aa17.64■□□□□ 0.41
SREBF1-216ENST00000490796 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-216ENST00000490796 SPAG7O75391 227 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 LAMP1P11279 417 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 PSMA4P25789 261 aaKnown RBP17.63■□□□□ 0.41
SREBF1-216ENST00000490796 UGT3A2Q3SY77 523 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 PRSS57Q6UWY2 283 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 STAC2Q6ZMT1 411 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 ZCCHC23Q6ZST2 131 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 TMEM171Q8WVE6 324 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 ROBO4Q8WZ75 1007 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 CPNE4Q96A23 557 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-216ENST00000490796 MOAP1Q96BY2 351 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 TACO1Q9BSH4 297 aaKnown RBP17.63■□□□□ 0.41
SREBF1-216ENST00000490796 ACTR6Q9GZN1 396 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 SLC17A7Q9P2U7 560 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 GPR52Q9Y2T5 361 aa17.63■□□□□ 0.41
SREBF1-216ENST00000490796 H7C1Q1 480 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 SKAP2O75563 359 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-216ENST00000490796 C6orf47O95873 294 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 LINGO3P0C6S8 592 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 ELK4P28324 431 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 SOAT1P35610 550 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 SERPINB5P36952 375 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 RNF144AP50876 292 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-216ENST00000490796 P2RX1P51575 399 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 ZNF117Q03924 483 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 FOXF1Q12946 379 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 PTGR1Q14914 329 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 RNPS1Q15287 305 aaKnown RBP17.62■□□□□ 0.41
SREBF1-216ENST00000490796 DCST2Q5T1A1 773 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 IL23RQ5VWK5 629 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 BHLHB9Q6PI77 547 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 ZNF704Q6ZNC4 412 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-216ENST00000490796 C22orf34Q6ZV56 151 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 TMCO5AQ8N6Q1 288 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 ATP6V1C2Q8NEY4 427 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 POC1BQ8TC44 478 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 ARL8AQ96BM9 186 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 TUBGCP3Q96CW5 907 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 MARK4Q96L34 752 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 CARD8Q9Y2G2 431 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 GPC6Q9Y625 555 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-216ENST00000490796 TLN2Q9Y4G6 2542 aa17.62■□□□□ 0.41
SREBF1-216ENST00000490796 NSD1Q96L73 2696 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-216ENST00000490796 NPIPA5A0A0B4J1W7 369 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 NPIPA7E9PJI5 369 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 ZNF195O14628 629 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 SMAD7O15105 426 aaKnown RBP17.61■□□□□ 0.41
SREBF1-216ENST00000490796 HEXAP06865 529 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 THBDP07204 575 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 NPIPA8P0DM63 369 aa17.61■□□□□ 0.41
SREBF1-216ENST00000490796 PRPS1L1P21108 318 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms