RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 OR2T3Q8NH03 318 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 OR8K3Q8NH51 312 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 WDR36Q8NI36 951 aaKnown RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SUN5Q8TC36 379 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 RLN3Q8WXF3 142 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PEX13Q92968 403 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 DNAJA3Q96EY1 480 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 C11orf24Q96F05 449 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 CASD1Q96PB1 797 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 MAPKAP1Q9BPZ7 522 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SIKE1Q9BRV8 207 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PAXXQ9BUH6 204 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC7A5P2Q9GIP4 190 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ELOVL4Q9GZR5 314 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ACTR8Q9H981 624 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 AGPAT5Q9NUQ2 364 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 DCAF13Q9NV06 445 aaKnown RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ETNK2Q9NVF9 386 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 HYPKQ9NX55 129 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 CLEC4EQ9ULY5 219 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 NOSIPQ9Y314 301 aaKnown RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 KIF16BQ96L93 1317 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 A8MUI8 341 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 H3BMH7 237 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 CETN3O15182 167 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 LANCL1O43813 399 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 NMT2O60551 498 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 WBP4O75554 376 aaKnown RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 AGTP01019 485 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 UQCRFS1P1P0C7P4 283 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 SDC1P18827 310 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 NCF2P19878 526 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 ACVR1BP36896 505 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 OR1G1P47890 313 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 MEOX2P50222 304 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 LYZP61626 148 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 ASAH1Q13510 395 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 PDK3Q15120 406 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 RAB35Q15286 201 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF528Q3MIS6 628 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF658Q5TYW1 1059 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 CADM2Q8N3J6 435 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 SPERTQ8NA61 448 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC22A8Q8TCC7 542 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 BADQ92934 168 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 RASD2Q96D21 266 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 IFT74Q96LB3 600 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC39A3Q9BRY0 314 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 GON7Q9BXV9 100 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 NMNAT2Q9BZQ4 307 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 HAUS4Q9H6D7 363 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 EXO5Q9H790 373 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 METTL7AQ9H8H3 244 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 YAE1D1Q9NRH1 226 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 STARD5Q9NSY2 213 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 DUS2Q9NX74 493 aaKnown RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 ATXN10Q9UBB4 475 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC2A6Q9UGQ3 507 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 BARX2Q9UMQ3 279 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 STK38LQ9Y2H1 464 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 RAD54L2Q9Y4B4 1467 aa3.6□□□□□ -1.83
HMGB1P38-201ENST00000490557 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 KLF18A0A0U1RQI7 1052 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 GSAPA4D1B5 854 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 GOLGA8SH3BPF8 625 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 LGALS8O00214 317 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 WRBO00258 174 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 RNF113AO15541 343 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ECI2O75521 394 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 CSF2P04141 144 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 IQCF3P0C7M6 154 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 UBTFL6P0CB48 400 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 RALBP11234 206 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 CYP11B1P15538 503 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 PAICSP22234 425 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZBTB25P24278 435 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 HSD17B2P37059 387 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 NUP62P37198 522 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 STK19P49842 368 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 P2RY4P51582 365 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 SUCLG1P53597 346 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 HADHBP55084 474 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 RPS8P62241 208 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 PUDPQ08623 228 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 PDIA5Q14554 519 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF699Q32M78 642 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ACSF3Q4G176 576 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 PAN3Q58A45 887 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 ARMC12Q5T9G4 340 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 LGSNQ5TDP6 509 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC22A10Q63ZE4 541 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 NCR3LG1Q68D85 454 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 FAM159AQ6UWV7 190 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 EFL1Q7Z2Z2 1120 aaKnown RBP3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 VPS36Q86VN1 386 aa3.59□□□□□ -1.83
HMGB1P38-201ENST00000490557 CERS5Q8N5B7 392 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms