RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	OR6M1	Q8NGM8	313 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RAB39B	Q96DA2	213 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	C19orf60	Q96EN9	201 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	LRR1	Q96L50	414 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	GPR137	Q96N19	417 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TAAR6	Q96RI8	345 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RANBP9	Q96S59	729 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	COQ7	Q99807	217 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	WWP1	Q9H0M0	922 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	WDR13	Q9H1Z4	485 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SLC26A1	Q9H2B4	701 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KCNK13	Q9HB14	408 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	GDF3	Q9NR23	364 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HOMER3	Q9NSC5	361 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PLCXD1	Q9NUJ7	323 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ATAD3A	Q9NVI7	634 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	LNPEP	Q9UIQ6	1025 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	MRPL11	Q9Y3B7	192 aa	Known RBP	4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CSNK1G3	Q9Y6M4	447 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ATP8B3	O60423	1300 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ZNF532	Q9HCE3	1301 aa		4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.11	□□□□□ -1.75
SSX2IP-208	ENST00000490476	LOC100653049	A0A140TA62	436 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TMEM89	A2RUT3	159 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	YJEFN3	A6XGL0	299 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SSX5	O60225	188 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SOCS5	O75159	536 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KRT34	O76011	436 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	AKR7A3	O95154	331 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	NXPH2	O95156	264 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SYNGR4	O95473	234 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	FGF19	O95750	216 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TXNDC12	O95881	172 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CD82	P27701	267 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	OXTR	P30559	389 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	GPR183	P32249	361 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CCR4	P51679	360 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	LIMK2	P53671	638 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KDSR	Q06136	332 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	MPPE1	Q53F39	396 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ADAMTSL4-AS1	Q5T5F5	129 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RAET1G	Q6H3X3	334 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	IRGC	Q6NXR0	463 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ZNF730	Q6ZMV8	503 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ZER1	Q7Z7L7	766 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ADCK1	Q86TW2	530 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KLHDC8B	Q8IXV7	354 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	EFCAB13	Q8IY85	973 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CMTM8	Q8IZV2	173 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RELL2	Q8NC24	303 aa	Predicted RBP	4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	OR9Q2	Q8NGE9	314 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TMEM190	Q8WZ59	177 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	FCGR1B	Q92637	280 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	C16orf45	Q96MC5	204 aa	Predicted RBP	4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KCNK16	Q96T55	309 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HOXD1	Q9GZZ0	328 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TECR	Q9NZ01	308 aa	Known RBP	4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	NLGN3	Q9NZ94	848 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	WWOX	Q9NZC7	414 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ERVK-18	Q9QC07	812 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PISD	Q9UG56	409 aa		4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476	MRPS2	Q9Y399	296 aa	Known RBP	4.1	□□□□□ -1.75
SSX2IP-208	ENST00000490476		A8MU76	341 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TMCO5B	A8MYB1	307 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	NPIPB9	F8W1W9	429 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	C19orf84	I3L1E1	186 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	NME2P1	O60361	137 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ANXA9	O76027	345 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	VENTX	O95231	258 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ANGPTL1	O95841	491 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	IFNB1	P01574	187 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ZCCHC18	P0CG32	403 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PRKACG	P22612	351 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CHML	P26374	656 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ID1	P41134	155 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ACADSB	P45954	432 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ASMT	P46597	345 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SLC26A2	P50443	739 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TPMT	P51580	245 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CCL11	P51671	97 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SST	P61278	116 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HTD2	P86397	168 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PLD1	Q13393	1074 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TMEM187	Q14656	261 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	EXOSC7	Q15024	291 aa	Known RBP	4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	OR1C1	Q15619	314 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	INA	Q16352	499 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RFTN2	Q52LD8	501 aa	Predicted RBP	4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	DCAF12	Q5T6F0	453 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TPGS2	Q68CL5	300 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ARHGAP17	Q68EM7	881 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HIST2H2AA3	Q6FI13	130 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476		Q6ZRP5	223 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CATSPERD	Q86XM0	798 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PARP8	Q8N3A8	854 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	LRRC17	Q8N6Y2	441 aa		4.09	□□□□□ -1.75
SSX2IP-208	ENST00000490476	OR5M9	Q8NGP3	310 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms