RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RNF165Q6ZSG1 346 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 Q6ZSR9 355 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
YIPF3-208ENST00000490447 PRIMA1Q86XR5 153 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 DDIASQ8IXT1 998 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 OR2T11Q8NH01 316 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 POC1BQ8TC44 478 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 PHOSPHO1Q8TCT1 267 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 UBLCP1Q8WVY7 318 aaPredicted RBP15.87■□□□□ 0.13
YIPF3-208ENST00000490447 ROBO4Q8WZ75 1007 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 AKAP1Q92667 903 aaKnown RBP eCLIP15.87■□□□□ 0.13
YIPF3-208ENST00000490447 FAM120BQ96EK7 910 aaKnown RBP15.87■□□□□ 0.13
YIPF3-208ENST00000490447 TRMOQ9BU70 441 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 BTBD2Q9BX70 525 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 HDHD5Q9BXW7 423 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 TXLNGYQ9BZA5 131 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 NGBQ9NPG2 151 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 ZNF701Q9NV72 531 aaPredicted RBP15.87■□□□□ 0.13
YIPF3-208ENST00000490447 FBXO34Q9NWN3 711 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 LAMP3Q9UQV4 416 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 SNX8Q9Y5X2 465 aa15.87■□□□□ 0.13
YIPF3-208ENST00000490447 DSCAMO60469 2012 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 HIVEP2P31629 2446 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 JMJD1CQ15652 2540 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 TMEM114B3SHH9 223 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 H3BNH8 94 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 LSM1O15116 133 aaKnown RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 LINGO3P0C6S8 592 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 KRT4P19013 534 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 EFNA1P20827 205 aaPredicted RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 IL32P24001 234 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 RPS4XP62701 263 aaKnown RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 FOXF1Q12946 379 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 LASP1Q14847 261 aaKnown RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 CD226Q15762 336 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 KANK2Q63ZY3 851 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 LRIG3Q6UXM1 1119 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 C10orf107Q8IVU9 208 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 RNF128Q8TEB7 428 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 ABHD3Q8WU67 409 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 IGFBPL1Q8WX77 278 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 S100PBPQ96BU1 408 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 STACQ99469 402 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 TMEM204Q9BSN7 226 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 C12orf65Q9H3J6 166 aaKnown RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 PPCSQ9HAB8 311 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 DUSP22Q9NRW4 184 aa15.86■□□□□ 0.13
YIPF3-208ENST00000490447 RAI1Q7Z5J4 1906 aaPredicted RBP15.86■□□□□ 0.13
YIPF3-208ENST00000490447 ZANQ9Y493 2812 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 CLOCKO15516 846 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 HMGN2P05204 90 aaKnown RBP15.85■□□□□ 0.13
YIPF3-208ENST00000490447 ADH6P28332 368 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 MAPK1P28482 360 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 RPL3P39023 403 aaKnown RBP15.85■□□□□ 0.13
YIPF3-208ENST00000490447 ZNF117Q03924 483 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 MLC1Q15049 377 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 GSPT2Q8IYD1 628 aaKnown RBP15.85■□□□□ 0.13
YIPF3-208ENST00000490447 CDS1Q92903 461 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 FBXW5Q969U6 566 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 TRMT61AQ96FX7 289 aaKnown RBP15.85■□□□□ 0.13
YIPF3-208ENST00000490447 HOXD1Q9GZZ0 328 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 PIGUQ9H490 435 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 ESRP2Q9H6T0 727 aaKnown RBP15.85■□□□□ 0.13
YIPF3-208ENST00000490447 GIN1Q9NXP7 522 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 KLHL13Q9P2N7 655 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 RNF115Q9Y4L5 304 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 DNAJC15Q9Y5T4 150 aa15.85■□□□□ 0.13
YIPF3-208ENST00000490447 KIAA1324LA8MWY0 1029 aaPredicted RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 GTPBP1O00178 669 aaKnown RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 SCAMP2O15127 329 aaKnown RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TRIM13O60858 407 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 PRKD3O94806 890 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 SHBGP04278 402 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 CD3EP07766 207 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 KRT16P08779 473 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 P2RX1P51575 399 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 ZNF844Q08AG5 666 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TP53BP2Q13625 1128 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 CAPRIN1Q14444 709 aaKnown RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 SPDYE7PQ495Y7 208 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TFAP2EQ6VUC0 442 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 FCRLAQ7L513 359 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TUSC5Q8IXB3 177 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 C4orf33Q8N1A6 199 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 ZNF614Q8N883 585 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 BANPQ8N9N5 519 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 FBXO27Q8NI29 283 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 ADAMTS15Q8TE58 950 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TWIST2Q8WVJ9 160 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 SRXN1Q9BYN0 137 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 TUBB1Q9H4B7 451 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 L2HGDHQ9H9P8 463 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 GP6Q9HCN6 339 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 FAF1Q9UNN5 650 aaPredicted RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 CARD8Q9Y2G2 431 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 GPC6Q9Y625 555 aaPredicted RBP15.84■□□□□ 0.13
YIPF3-208ENST00000490447 PCNX3Q9H6A9 2034 aa15.84■□□□□ 0.13
YIPF3-208ENST00000490447 ZNF195O14628 629 aa15.83■□□□□ 0.12
YIPF3-208ENST00000490447 GCM2O75603 506 aaPredicted RBP15.83■□□□□ 0.12
YIPF3-208ENST00000490447 BCKDHAP12694 445 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms