RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 OR14A16Q8NHC5 309 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TMEM163Q8TC26 289 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CCNL2Q96S94 520 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 NMNAT1Q9HAN9 279 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CSNK1G1Q9HCP0 422 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ERVK13-1Q9NX77 482 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TEX10Q9NXF1 929 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CYP8B1Q9UNU6 501 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GALR3O60755 368 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GCH1P30793 250 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 HTR2BP41595 481 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 HNRNPA1L2Q32P51 320 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 C7orf34Q96L11 122 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TREX1Q9NSU2 369 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 F8W036 122 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TIMP1P01033 207 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TUBG1P23258 451 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CHATP28329 748 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 PPP1R8Q12972 351 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 YOD1Q5VVQ6 348 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 RPL22L1Q6P5R6 122 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CNIH2Q6PI25 160 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CREB3L4Q8TEY5 395 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 C19orf43Q9BQ61 176 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GPR83Q9NYM4 423 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 BOKQ9UMX3 212 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 IGHG1P01857 330 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TAS2R30P59541 319 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 MEPCEQ7L2J0 689 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CPNE8Q86YQ8 564 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 SVBPQ8N300 66 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ZNF321PQ8N8H1 164 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 WDR20Q8TBZ3 569 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TCTN2Q96GX1 697 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 THAP7Q9BT49 309 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 NXT1Q9UKK6 140 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 KLK4Q9Y5K2 254 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TSTD3H0UI37 97 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TK1P04183 234 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 MAS1P04201 325 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 SERPINA5P05154 406 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GAAP10253 952 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GPX3P22352 226 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 RAB5CP51148 216 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 IL13RA1P78552 427 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 RBPJQ06330 500 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 OR4M1Q8NGD0 313 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 SCAMP4Q969E2 229 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 WIF1Q9Y5W5 379 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 A0A087WUU8 490 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 MBLAC1A4D2B0 266 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 NPIPA7E9PJI5 369 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 LDB2O43679 373 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 NPIPA8P0DM63 369 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 RPS2P15880 293 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CD6P30203 668 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 MAN2A2P49641 1150 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 GAREM2Q75VX8 874 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 B3GNT7Q8NFL0 401 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ABHD11Q8NFV4 315 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 LRFN5Q96NI6 719 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 OR51J1Q9H342 316 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CWH43Q9H720 699 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 H0YIV9 168 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ZFAND5O76080 213 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 OR2T7P0C7T2 308 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 PRKACBP22694 351 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 AFF3P51826 1226 aaKnown RBP8.33□□□□□ -1.08
LSAMP-205ENST00000490035 UAP1L1Q3KQV9 507 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 CRTC1Q6UUV9 634 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 TECPR1Q7Z6L1 1165 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 OR2T27Q8NH04 317 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 SLAMF9Q96A28 289 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ENKD1Q9H0I2 346 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 BIN3Q9NQY0 253 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 INIPQ9NRY2 104 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 ZNF281Q9Y2X9 895 aa8.33□□□□□ -1.08
LSAMP-205ENST00000490035 OR6C6A6NF89 314 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 KRBOX1C9JBD0 128 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 FAM72CH0Y354 149 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 C1orf105O95561 183 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 IVDP26440 423 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 BDKRB2P30411 391 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 RBMS2Q15434 407 aaKnown RBP8.32□□□□□ -1.08
LSAMP-205ENST00000490035 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.32□□□□□ -1.08
LSAMP-205ENST00000490035 FAM72AQ5TYM5 149 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 FAM69BQ5VUD6 431 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 FAM72DQ6L9T8 149 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 FAM72BQ86X60 149 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 NKAIN3Q8N8D7 197 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 CLEC1AQ8NC01 280 aa8.32□□□□□ -1.08
LSAMP-205ENST00000490035 AUTS2Q8WXX7 1259 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms