RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SMURF2Q9HAU4 748 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 USE1Q9NZ43 259 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 TMCC3Q9ULS5 477 aa19.15■□□□□ 0.66
SND1-214ENST00000489417 CNOT1A5YKK6 2376 aaKnown RBP19.15■□□□□ 0.66
SND1-214ENST00000489417 A0A1W2PRQ8 180 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 GTPBP1O00178 669 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 MAN1A2O60476 641 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 HTR2AP28223 471 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 SOX3P41225 446 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 ACAA2P42765 397 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 CLK3P49761 638 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 SSR4P51571 173 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 PPP2R2BQ00005 443 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 FOXD4Q12950 439 aaPredicted RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 DGCR6Q14129 220 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 NTRK2Q16620 822 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 H3F3CQ6NXT2 135 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 JMJD6Q6NYC1 403 aaPredicted RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 OPN5Q6U736 354 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 MARCH3Q86UD3 253 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 ADAMTS16Q8TE57 1224 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 ZNF597Q96LX8 424 aa19.14■□□□□ 0.65
SND1-214ENST00000489417 RBM4BQ9BQ04 359 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 RBM4Q9BWF3 364 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 EXOSC3Q9NQT5 275 aaKnown RBP19.14■□□□□ 0.65
SND1-214ENST00000489417 PTPRZ1P23471 2315 aaPredicted RBP19.13■□□□□ 0.65
SND1-214ENST00000489417 TRBV4-1A0A0J9YWV2 114 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 ZNF264O43296 627 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 OIP5O43482 229 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 NDUFB5O43674 189 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 SCO2O43819 266 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 CCNB2O95067 398 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 ELAVL4P26378 380 aaKnown RBP19.13■□□□□ 0.65
SND1-214ENST00000489417 HSPA13P48723 471 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 ST3GAL3Q11203 375 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 SKP2Q13309 424 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 OR1Q1Q15612 314 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 MICAQ29983 383 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 ZNF791Q3KP31 576 aaPredicted RBP19.13■□□□□ 0.65
SND1-214ENST00000489417 DCAF10Q5QP82 559 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 DCST1Q5T197 706 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 OR10G2Q8NGC3 310 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 BRIX1Q8TDN6 353 aaKnown RBP19.13■□□□□ 0.65
SND1-214ENST00000489417 GRHL3Q8TE85 626 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 RNF138Q8WVD3 245 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 ASB15Q8WXK1 588 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 SLC41A3Q96GZ6 507 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 THOC3Q96J01 351 aaKnown RBP19.13■□□□□ 0.65
SND1-214ENST00000489417 FER1L6-AS2Q96M78 137 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 FUZQ9BT04 418 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 RTN4RQ9BZR6 473 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 TRIM2Q9C040 744 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 LAT2Q9GZY6 243 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 TMEM27Q9HBJ8 222 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 MAN2C1Q9NTJ4 1040 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 CARD8Q9Y2G2 431 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 C15orf41Q9Y2V0 281 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 LRRC42Q9Y546 428 aa19.13■□□□□ 0.65
SND1-214ENST00000489417 C7orf72A4D263 438 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 TRAPPC13A5PLN9 417 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 FAAHO00519 579 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ADAM11O75078 769 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 OR6B1O95007 311 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ANGPTL1O95841 491 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ALPLP05186 524 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 EPS8Q12929 822 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 SRSF6Q13247 344 aaKnown RBP19.12■□□□□ 0.65
SND1-214ENST00000489417 CLN3Q13286 438 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 TRAM2Q15035 370 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ANKRD34AQ69YU3 496 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 GDF7Q7Z4P5 450 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 TMCO5AQ8N6Q1 288 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ARSGQ96EG1 525 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ANKRD19PQ9H560 264 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 ATP13A2Q9NQ11 1180 aa19.12■□□□□ 0.65
SND1-214ENST00000489417 EXPH5Q8NEV8 1989 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 TP53I11O14683 189 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 EIF4E2O60573 245 aaKnown RBP19.11■□□□□ 0.65
SND1-214ENST00000489417 THRBP10828 461 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 SPINK2P20155 84 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 AIMP2Q13155 320 aaKnown RBP19.11■□□□□ 0.65
SND1-214ENST00000489417 FAHD1Q6P587 224 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 ZNF613Q6PF04 617 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 MISPQ8IVT2 679 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 DND1Q8IYX4 353 aaKnown RBP19.11■□□□□ 0.65
SND1-214ENST00000489417 SIRT6Q8N6T7 355 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 ATG16L2Q8NAA4 619 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 OR10G3Q8NGC4 313 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 PSD2Q9BQI7 771 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 SCNM1Q9BWG6 230 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 SMPD3Q9NY59 655 aaPredicted RBP19.11■□□□□ 0.65
SND1-214ENST00000489417 KIF17Q9P2E2 1029 aa19.11■□□□□ 0.65
SND1-214ENST00000489417 SH3PXD2BA1X283 911 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 ARRDC5A6NEK1 342 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 ADAM10O14672 748 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 THY1P04216 161 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 RYKP34925 604 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 DAPP51397 102 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 ZNF117Q03924 483 aa19.1■□□□□ 0.65
SND1-214ENST00000489417 SEC23BQ15437 767 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms