RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RBM24Q9BX46 236 aaKnown RBP22.48■■□□□ 1.19
HMGN1-217ENST00000489072 PIGMQ9H3S5 423 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 MANSC1Q9H8J5 431 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 PCDHGB4Q9UN71 923 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF175Q9Y473 711 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 C9JVG2 144 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 E9PBE3 544 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 CTAG2O75638 210 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 LINGO3P0C6S8 592 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 PON3Q15166 354 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 DPY19L1Q2PZI1 675 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 NDUFAF6Q330K2 333 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 OR2A2Q6IF42 318 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 VWA1Q6PCB0 445 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 SPATA19Q7Z5L4 167 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 KIF18BQ86Y91 864 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 MIPOL1Q8TD10 442 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 FAM222BQ8WU58 562 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 OR51I1Q9H343 314 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 GALNT8Q9NY28 637 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 PACSIN3Q9UKS6 424 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 CARD8Q9Y2G2 431 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 GPR45Q9Y5Y3 372 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 F8P00451 2351 aa22.47■■□□□ 1.19
HMGN1-217ENST00000489072 TRPC5OSA6NMA1 111 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 EIF1AYO14602 144 aaKnown RBP22.46■■□□□ 1.19
HMGN1-217ENST00000489072 C1QCP02747 245 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 OPN1LWP04000 364 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 CRHP06850 196 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 UQCRC2P22695 453 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 S100A3P33764 101 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 RPS3AP61247 264 aaKnown RBP22.46■■□□□ 1.19
HMGN1-217ENST00000489072 SORDQ00796 357 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 CTU2Q2VPK5 515 aaKnown RBP22.46■■□□□ 1.19
HMGN1-217ENST00000489072 MAVSQ7Z434 540 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 VPS37AQ8NEZ2 397 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 LINC01560Q8TB33 94 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 NRGNQ92686 78 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 STARD4Q96DR4 205 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 ADGRG7Q96K78 797 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 GPATCH1Q9BRR8 931 aaKnown RBP22.46■■□□□ 1.19
HMGN1-217ENST00000489072 RNF122Q9H9V4 155 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 KCNE5Q9UJ90 142 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 ITGB1BP2Q9UKP3 347 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 ICAM5Q9UMF0 924 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 DTNAQ9Y4J8 743 aa22.46■■□□□ 1.19
HMGN1-217ENST00000489072 HIVEP1P15822 2718 aa22.45■■□□□ 1.19
HMGN1-217ENST00000489072 CENPVL1A0A0U1RR11 272 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 FAM221AA4D161 298 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 TUBAL3A6NHL2 446 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 DUXAA6NLW8 204 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 A8MXE2 369 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 FCMRO60667 390 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 AQP8O94778 261 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 IL11P20809 199 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 KIR2DL2P43627 348 aaPredicted RBP22.45■■□□□ 1.18
HMGN1-217ENST00000489072 CPA2P48052 419 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 EEF1A1P68104 462 aaKnown RBP22.45■■□□□ 1.18
HMGN1-217ENST00000489072 ARHGAP11BQ3KRB8 267 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 AGBL2Q5U5Z8 902 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 EEF1A1P5Q5VTE0 462 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 SAXO2Q658L1 398 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF614Q8N883 585 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 CNEP1R1Q8N9A8 125 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF524Q96C55 264 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 CCDC115Q96NT0 180 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 NMUR2Q9GZQ4 415 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 TMEM185BQ9H7F4 350 aa22.45■■□□□ 1.18
HMGN1-217ENST00000489072 DNAJB12Q9NXW2 375 aaKnown RBP22.45■■□□□ 1.18
HMGN1-217ENST00000489072 A6NNC1 897 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 H3BNH8 94 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 AK1P00568 194 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 OR12D1P0DN82 309 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 EIF1AXP47813 144 aaKnown RBP22.44■■□□□ 1.18
HMGN1-217ENST00000489072 SLC6A8P48029 635 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 P2RX1P51575 399 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 RAC1P63000 192 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 SIRPAP78324 504 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 FOXF1Q12946 379 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 GUSBP1Q15486 140 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 GPR68Q15743 365 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 TOMM34Q15785 309 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-217ENST00000489072 SGCBQ16585 318 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 SLC9B1Q4ZJI4 515 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 PDZK1Q5T2W1 519 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 HEPHL1Q6MZM0 1159 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 TNFAIP8L2Q6P589 184 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-217ENST00000489072 BTLAQ7Z6A9 289 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 OR10D3Q8NH80 312 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 RAB8BQ92930 207 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 NEURL3Q96EH8 262 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 MAELQ96JY0 434 aaKnown RBP22.44■■□□□ 1.18
HMGN1-217ENST00000489072 STOML1Q9UBI4 398 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 BTNL2Q9UIR0 455 aa22.44■■□□□ 1.18
HMGN1-217ENST00000489072 A0A0J9YW62 118 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 SLCO1B7G3V0H7 640 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 GTPBP1O00178 669 aaKnown RBP22.43■■□□□ 1.18
HMGN1-217ENST00000489072 ZNF195O14628 629 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 MSTNO14793 375 aa22.43■■□□□ 1.18
HMGN1-217ENST00000489072 EFNA2O43921 213 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms