RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CD99P14209 185 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 BGNP21810 368 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ME2P23368 584 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 UGT2B10P36537 528 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 SLC1A6P48664 564 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 RPL14P50914 215 aaKnown RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CASP9P55211 416 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 C21orf58P58505 322 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF117Q03924 483 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MAD2L1Q13257 205 aaPredicted RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 FGFBP1Q14512 234 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 GUSBP1Q15486 140 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 EXOC3L2Q2M3D2 409 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 NDUFAF6Q330K2 333 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CEP85LQ5SZL2 805 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ANKRD34AQ69YU3 496 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 HBMQ6B0K9 141 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 OR4F3Q6IEY1 312 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CBLN3Q6UW01 205 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 C6orf120Q7Z4R8 191 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CAMKMTQ7Z624 323 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 TGIF2LYQ8IUE0 185 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 CLECL1Q8IZS7 167 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 LILRA2Q8N149 483 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF527Q8NB42 609 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 OR5D16Q8NGK9 328 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 OR2V1Q8NHB1 315 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 SFXN5Q8TD22 340 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 OSTF1Q92882 214 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MOAP1Q96BY2 351 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MBD6Q96DN6 1003 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ADGRG7Q96K78 797 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 OR7D2Q96RA2 312 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 SORT1Q99523 831 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MED18Q9BUE0 208 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 SSU72Q9NP77 194 aaKnown RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 ASIC5Q9NY37 505 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 RAP2CQ9Y3L5 183 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MPDZO75970 2070 aa10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
CCHCR1-215ENST00000488920 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 H3BNH8 94 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 TM9SF1O15321 606 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SIAH2O43255 324 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 EFNA2O43921 213 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF500O60304 480 aaPredicted RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SOX30O94993 753 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 GOSR1O95249 250 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 DHRS4L1P0CG22 281 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 KLK2P20151 261 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 MATN1P21941 496 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SHC1P29353 583 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SFTPDP35247 375 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 EIF1P41567 113 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 PCYT1AP49585 367 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ATP12AP54707 1039 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 CTBP2P56545 445 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 RIPPLY3P57055 190 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 CARD18P57730 90 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 FOXF1Q12946 379 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 STX3Q13277 289 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 TOMM34Q15785 309 aaPredicted RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SMU1Q2TAY7 513 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 BHLHB9Q6PI77 547 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ESPNLQ6ZVH7 1005 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 OLIG3Q7RTU3 272 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF550Q7Z398 422 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 MTERF4Q7Z6M4 381 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ANKRD46Q86W74 232 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF614Q8N883 585 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ATP6V1C2Q8NEY4 427 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 OR4A15Q8NGL6 344 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 RFWD2Q8NHY2 731 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 FBXO27Q8NI29 283 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ROBO4Q8WZ75 1007 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF524Q96C55 264 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZC3HAV1LQ96H79 300 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ZIM3Q96PE6 472 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ALPK1Q96QP1 1244 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SDF2Q99470 211 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 PAIP2Q9BPZ3 127 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 TMUB1Q9BVT8 246 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 NUF2Q9BZD4 464 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 DPY30Q9C005 99 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 KLHL4Q9C0H6 718 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 SERHL2Q9H4I8 314 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 NEUROD4Q9HD90 331 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 PLSCR4Q9NRQ2 329 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 PNPOQ9NVS9 261 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 PAQR5Q9NXK6 330 aaPredicted RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 RAB21Q9UL25 225 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 MCTS1Q9ULC4 181 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 ICAM5Q9UMF0 924 aa10.69□□□□□ -0.7
CCHCR1-215ENST00000488920 EMC9Q9Y3B6 208 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms