RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MAPK14Q16539 360 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 NDUFAF6Q330K2 333 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 RNF130Q86XS8 419 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 FUNDC1Q8IVP5 155 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 MIER2Q8N344 545 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF527Q8NB42 609 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 ZG16BQ96DA0 208 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 EXD2Q9NVH0 621 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 MKLN1Q9UL63 735 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 CARD8Q9Y2G2 431 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 AP4B1Q9Y6B7 739 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 ITPR2Q14571 2701 aa14.38□□□□□ -0.11
CTDSP1-209ENST00000488627 FAM234BA2RU67 622 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 SERINC4A6NH21 518 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 H3BML4 177 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 SYT5O00445 386 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 RFXANKO14593 260 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 DNAJA2O60884 412 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 TNFRSF21O75509 655 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 IL18BPO95998 194 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 ZCCHC18P0CG32 403 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF17P17021 662 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 BMP5P22003 454 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 CHI3L1P36222 383 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 GPR68Q15743 365 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 COX20Q5RI15 118 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 PDZK1Q5T2W1 519 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 TYW3Q6IPR3 259 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 MEX3BQ6ZN04 569 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 FRRS1Q6ZNA5 592 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 MSANTD1Q6ZTZ1 278 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 GGNQ86UU5 652 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 UBQLNLQ8IYU4 475 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 ZFP90Q8TF47 636 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 VPS33AQ96AX1 596 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 ZBTB8AQ96BR9 441 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 ROPN1LQ96C74 230 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 SLC52A3Q9NQ40 469 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 POLE3Q9NRF9 147 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 PCNX3Q9H6A9 2034 aa14.37□□□□□ -0.11
CTDSP1-209ENST00000488627 FBN2P35556 2912 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 H3BNH8 94 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 DVL2O14641 736 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 POLR3GO15318 223 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 EFNA2O43921 213 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 KIAA0513O60268 411 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 CD1EP15812 388 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 IL11P20809 199 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 KHKP50053 298 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 P2RX1P51575 399 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 AGFG1P52594 562 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 SUMO3P55854 103 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 MAPK11Q15759 364 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 TOMM34Q15785 309 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 CTU2Q2VPK5 515 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 FBXL19-AS1Q494R0 122 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 GTDC1Q4AE62 458 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 ATAD3BQ5T9A4 648 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 C16orf62Q7Z3J2 963 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 METTL25Q8N6Q8 603 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 ANKFN1Q8N957 763 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 GPR119Q8TDV5 335 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 STON2Q8WXE9 905 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 FIG4Q92562 907 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 GTF2H4Q92759 462 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 ARSGQ96EG1 525 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 ADGRG7Q96K78 797 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 RNF145Q96MT1 663 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 RUBCNLQ9H714 662 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 JKAMPQ9P055 326 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 WDR45Q9Y484 360 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 KIAA1549Q9HCM3 1950 aa14.36□□□□□ -0.11
CTDSP1-209ENST00000488627 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ETV2O00321 342 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ADAMDEC1O15204 470 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 SEC14L5O43304 696 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 EIF4E2O60573 245 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 EDF1O60869 148 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 BCAS1O75363 584 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 NTN1O95631 604 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 TMIGD3P0DMS9 266 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 HOXB9P17482 250 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 OPRM1P35372 400 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF41P51814 821 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 EEFSECP57772 596 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 RAC1P63000 192 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 TXNL4AP83876 142 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 CHRNEQ04844 493 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 SKP2Q13309 424 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 TIGD2Q4W5G0 525 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 GRAMD2AQ8IUY3 354 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 ZNF614Q8N883 585 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 PNPT1Q8TCS8 783 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 OIT3Q8WWZ8 545 aa14.35□□□□□ -0.11
CTDSP1-209ENST00000488627 INTS12Q96CB8 462 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms