RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 IST1P53990 364 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 CCZ1BP86790 482 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 CCZ1P86791 482 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 PRR30Q53SZ7 412 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 TAF3Q5VWG9 929 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 VASH2Q86V25 355 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 LUZP1Q86V48 1076 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 STHQ8IWL8 128 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 CLDN23Q96B33 292 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 MED8Q96G25 268 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 CCDC43Q96MW1 224 aaKnown RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 OR5M11Q96RB7 305 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 TRIM9Q9C026 710 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 TMEM245Q9H330 911 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 IL1RL2Q9HB29 575 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 SLC25A19Q9HC21 320 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 DDX28Q9NUL7 540 aaKnown RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 ADAM22Q9P0K1 906 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 AKAP7Q9P0M2 348 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 MLXQ9UH92 298 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 DIMT1Q9UNQ2 313 aaKnown RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 Q9Y3F1 56 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 MTF2Q9Y483 593 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 LCTP09848 1927 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 FAM168BA1KXE4 195 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 CYB561D2O14569 222 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 RRP8O43159 456 aaKnown RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 HSF2BPO75031 334 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 ZNF253O75346 499 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 NME6O75414 186 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 PGAM2P15259 253 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 ATP6V1B1P15313 513 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 FLNAP21333 2647 aaKnown RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 MARCKSP29966 332 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 CASP3P42574 277 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 RGRP47804 291 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 NUMBP49757 651 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 SLC25A1P53007 311 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 IGLV3-21P80748 117 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 BNIP1Q12981 228 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 GSG1Q2KHT4 349 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 C2orf76Q3KRA6 126 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 ACER2Q5QJU3 275 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 NKAIN2Q5VXU1 208 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 WDR25Q64LD2 544 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 STEAP1BQ6NZ63 245 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 C11orf53Q8IXP5 236 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 CCDC170Q8IYT3 715 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 ZNF525Q8N782 197 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 BCL2L2Q92843 193 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 C5orf30Q96GV9 206 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 FAM173AQ9BQD7 235 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 NTMT1Q9BV86 223 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 FAM212BQ9NTI7 297 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 HYPKQ9NX55 129 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 EMCNQ9ULC0 261 aa3.23□□□□□ -1.89
ITGB1-214ENST00000488427 TNRC6BQ9UPQ9 1833 aaKnown RBP3.23□□□□□ -1.89
ITGB1-214ENST00000488427 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 A0A0A6YYD4 124 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 EFCAB7A8K855 629 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 EI24O14681 340 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 TNFSF11O14788 317 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 GPAA1O43292 621 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 FLOT1O75955 427 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 CXCL12P48061 93 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 ZNF131P52739 623 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 ERVPABLB-1P60509 514 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 SSTP61278 116 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 KLF5Q13887 457 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 EXOSC7Q15024 291 aaKnown RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 ZNF674Q2M3X9 581 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 RANBP3LQ86VV4 465 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 WDR49Q8IV35 697 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 LEMD2Q8NC56 503 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 CRYGNQ8WXF5 182 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 FAM46BQ96A09 425 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 BIRC7Q96CA5 298 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 NTNG2Q96CW9 530 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 RAB39BQ96DA2 213 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 EPSTI1Q96J88 318 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 C9orf85Q96MD7 179 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 NAP1L3Q99457 506 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 PAXXQ9BUH6 204 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 ST6GALNAC5Q9BVH7 336 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 OSBPL8Q9BZF1 889 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 DNAJC11Q9NVH1 559 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 DPM3Q9P2X0 92 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 NOL7Q9UMY1 257 aaKnown RBP3.22□□□□□ -1.89
ITGB1-214ENST00000488427 ENTPD4Q9Y227 616 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 KIF25-AS1Q9Y6Z4 181 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 LRRK1Q38SD2 2015 aa3.22□□□□□ -1.89
ITGB1-214ENST00000488427 RAD50Q92878 1312 aa3.21□□□□□ -1.89
ITGB1-214ENST00000488427 TLN2Q9Y4G6 2542 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 A0A1W2PRV1 198 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 HIDE1A8MVS5 230 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms