RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ZNF704Q6ZNC4 412 aaPredicted RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 MED12LQ86YW9 2145 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 DDIASQ8IXT1 998 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 IGFBPL1Q8WX77 278 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ROBO4Q8WZ75 1007 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 REXO5Q96IC2 774 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ACTR6Q9GZN1 396 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 OR10A4Q9H209 315 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 EML4Q9HC35 981 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 DUSP22Q9NRW4 184 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ZCCHC3Q9NUD5 404 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 SNX8Q9Y5X2 465 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ABCA2Q9BZC7 2435 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 TRIM64A6NGJ6 449 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 TRIM64BA6NI03 449 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF195O14628 629 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 NPHS1O60500 1241 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PEX11AO75192 247 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PLAUP00749 431 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 LAMP1P11279 417 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PSMB1P20618 241 aaKnown RBP13.67□□□□□ -0.22
TRIM50-203ENST00000488217 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PTH2RP49190 550 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 CCT3P49368 545 aaKnown RBP13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PCLAFQ15004 111 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 CD226Q15762 336 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM201Q5SNT2 666 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 WFDC8Q8IUA0 241 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 NATD1Q8N6N6 113 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 STEAP2Q8NFT2 490 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 OR7A2PQ8NGA2 310 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PHOSPHO1Q8TCT1 267 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 EPS8L3Q8TE67 593 aaKnown RBP13.67□□□□□ -0.22
TRIM50-203ENST00000488217 NUDT8Q8WV74 236 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 OR5P2Q8WZ92 322 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 JADE3Q92613 823 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 CDS1Q92903 461 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PLPPR2Q96GM1 343 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 PPP3R2Q96LZ3 170 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 KLHL15Q96M94 604 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
TRIM50-203ENST00000488217 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF701Q9NV72 531 aaPredicted RBP13.67□□□□□ -0.22
TRIM50-203ENST00000488217 TLDC2A0PJX2 215 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM233B4DJY2 109 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 H3BNH8 94 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 GTPBP1O00178 669 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 PIP5K1BO14986 540 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TMCC2O75069 709 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 LYPLA1O75608 230 aaPredicted RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 PRKD3O94806 890 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 CNOT4O95628 575 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TUBBP07437 444 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 CHRNGP07510 517 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 ATP6V1C1P21283 382 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 MAPK1P28482 360 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 AGTR1P30556 359 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 SFTPDP35247 375 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 RPL3P39023 403 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 RNPS1Q15287 305 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 LSM12Q3MHD2 195 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 CBLN3Q6UW01 205 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF611Q8N823 705 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF527Q8NB42 609 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 FBXO27Q8NI29 283 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM171Q8WVE6 324 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TWIST2Q8WVJ9 160 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 COQ8BQ96D53 544 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 PRPF18Q99633 342 aaKnown RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 ICAM5Q9UMF0 924 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 FAF1Q9UNN5 650 aaPredicted RBP13.66□□□□□ -0.22
TRIM50-203ENST00000488217 CARD8Q9Y2G2 431 aa13.66□□□□□ -0.22
TRIM50-203ENST00000488217 GJE1A6NN92 205 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 SCAMP2O15127 329 aaKnown RBP13.65□□□□□ -0.22
TRIM50-203ENST00000488217 NUDT14O95848 222 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 NID1P14543 1247 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 SHC1P29353 583 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 HPCAL1P37235 193 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 P2RX1P51575 399 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 ATP12AP54707 1039 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF117Q03924 483 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 ALKBH2Q6NS38 261 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 TUSC5Q8IXB3 177 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 GPR119Q8TDV5 335 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRIM50-203ENST00000488217 HSD17B8Q92506 261 aa13.65□□□□□ -0.22
TRIM50-203ENST00000488217 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
TRIM50-203ENST00000488217 CXorf56Q9H5V9 222 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms