RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SCARB2Q14108 478 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 DEFB116Q30KQ4 102 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 COX15Q7KZN9 410 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 GOLGA7Q7Z5G4 137 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 OR2L8Q8NGY9 312 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 ZNF641Q96N77 438 aaPredicted RBP1.9□□□□□ -2.11
SMC4-219ENST00000487747 RASL11BQ9BPW5 248 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 TMEM121Q9BTD3 319 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 SRXN1Q9BYN0 137 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 TMEM245Q9H330 911 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 DCDC2Q9UHG0 476 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 FAM153AQ9UHL3 310 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 PSMA7O14818 248 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 CSF2P04141 144 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 MRPL3P09001 348 aaKnown RBP1.89□□□□□ -2.11
SMC4-219ENST00000487747 THRBP10828 461 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 EMDP50402 254 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 NOVA1P51513 510 aaKnown RBP1.89□□□□□ -2.11
SMC4-219ENST00000487747 CRISP3P54108 245 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 CCDC57Q2TAC2 916 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 CHRFAM7AQ494W8 412 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 SLC39A12Q504Y0 691 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 ATF7IP2Q5U623 682 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 WDR74Q6RFH5 385 aaPredicted RBP1.89□□□□□ -2.11
SMC4-219ENST00000487747 CYS1Q717R9 158 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 ARMCX2Q7L311 632 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 P4HA3Q7Z4N8 544 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 LPCAT1Q8NF37 534 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 AENQ8WTP8 325 aaKnown RBP1.89□□□□□ -2.11
SMC4-219ENST00000487747 RAB7BQ96AH8 199 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 C5orf30Q96GV9 206 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 MARCOQ9UEW3 520 aaPredicted RBP1.89□□□□□ -2.11
SMC4-219ENST00000487747 UGT2A1Q9Y4X1 527 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 TTC21BQ7Z4L5 1316 aa1.89□□□□□ -2.11
SMC4-219ENST00000487747 COL27A1Q8IZC6 1860 aaPredicted RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 A0A0U1RRA0 63 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 TTC26A0AVF1 554 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 CASKO14936 926 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 ZNF263O14978 683 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 N4BP1O75113 896 aaKnown RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 ZNF780AO75290 641 aaPredicted RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 TRIM3O75382 744 aaPredicted RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 ZCCHC18P0CG32 403 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 CELP19835 753 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 COX7A1P24310 79 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 HOXA9P31269 272 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 MAGEA4P43358 317 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 TFPI2P48307 235 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 GALK2Q01415 458 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 NME3Q13232 169 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 AGKQ53H12 422 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 CASC10Q5T4H9 136 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 VRK2Q86Y07 508 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 LRRC17Q8N6Y2 441 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 UCN3Q969E3 161 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 HDHD3Q9BSH5 251 aaPredicted RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 POLR2J2Q9GZM3 115 aaKnown RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 POLR2J3Q9H1A7 115 aaKnown RBP1.88□□□□□ -2.11
SMC4-219ENST00000487747 COG4Q9H9E3 785 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 GRPEL1Q9HAV7 217 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 PLA2G4CQ9UP65 541 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 GMPPBQ9Y5P6 360 aa1.88□□□□□ -2.11
SMC4-219ENST00000487747 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 H0Y626 953 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ALOX15BO15296 676 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 SLC7A4O43246 635 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 SNAPINO95295 136 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 SLC4A1P02730 911 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ALPPL2P10696 532 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
SMC4-219ENST00000487747 HTR5AP47898 357 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 HERVK_113P63132 956 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ERVK-8P63133 956 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ABCA11PQ4W5N1 156 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 C5orf47Q569G3 176 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 GLRA4Q5JXX5 417 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 RABGAP1LQ5R372 815 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 RFLNAQ6ZTI6 216 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 HMGN2P46Q86SG4 172 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 TTC5Q8N0Z6 440 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 PNKDQ8N490 385 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 TSNARE1Q96NA8 513 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ERVK-6Q9BXR3 956 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 ZDHHC4Q9NPG8 344 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 BTNL2Q9UIR0 455 aa1.87□□□□□ -2.11
SMC4-219ENST00000487747 TNFSF13O75888 250 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 ZNF18P17022 549 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 GNPDA1P46926 289 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 UNC5DQ6UXZ4 953 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 PAQR9Q6ZVX9 377 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 C1orf186Q6ZWK4 172 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 CYB561D1Q8N8Q1 229 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 GIMAP1Q8WWP7 306 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 MCHR1Q99705 422 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 SPIN2AQ99865 258 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 SPIN2BQ9BPZ2 258 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 SLC5A7Q9GZV3 580 aa1.86□□□□□ -2.11
SMC4-219ENST00000487747 UTP6Q9NYH9 597 aaKnown RBP1.86□□□□□ -2.11
SMC4-219ENST00000487747 XPO7Q9UIA9 1087 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms