RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 RBBP4Q09028 425 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 FGFBP1Q14512 234 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ZNF585AQ6P3V2 769 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 GTPBP8Q8N3Z3 284 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-205ENST00000487150 MEIOBQ8N635 442 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ANKFN1Q8N957 763 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 OR8J3Q8NGG0 315 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 OR5W2Q8NH69 310 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 SLC38A5Q8WUX1 472 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 WDR60Q8WVS4 1066 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 TMEM234Q8WY98 164 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 SH3YL1Q96HL8 342 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 TIMP4Q99727 224 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
LIMS3-205ENST00000487150 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
LIMS3-205ENST00000487150 SPATA5L1Q9BVQ7 753 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 UGT2B28Q9BY64 529 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 RTN4RQ9BZR6 473 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 BCL2L10Q9HD36 194 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 MED17Q9NVC6 651 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ZNF232Q9UNY5 417 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ANGPT4Q9Y264 503 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ARL2BPQ9Y2Y0 163 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 SLC6A5Q9Y345 797 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 L3MBTL1Q9Y468 752 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 ESPL1Q14674 2120 aa13.28□□□□□ -0.28
LIMS3-205ENST00000487150 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.28
LIMS3-205ENST00000487150 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 GJE1A6NN92 205 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 H0Y3Z8 333 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ZIC3O60481 467 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 SEMA7AO75326 666 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 WISP2O76076 250 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 LDLRP01130 860 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 NPIPA8P0DM63 369 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 NID1P14543 1247 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ETS2P15036 469 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 PGCP20142 388 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 SLC6A2P23975 617 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 CCR4P51679 360 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 KCNJ10P78508 379 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 CHRNEQ04844 493 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 SKP2Q13309 424 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 SYPL1Q16563 259 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 PLPPR5Q32ZL2 321 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 LACC1Q8IV20 430 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ULK2Q8IYT8 1036 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ZNF808Q8N4W9 903 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ST8SIA1Q92185 356 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 RND1Q92730 232 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 MRGPRX4Q96LA9 322 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 PNPLA3Q9NST1 481 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 ICAM5Q9UMF0 924 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 CAMK2AQ9UQM7 478 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.29
LIMS3-205ENST00000487150 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 UBR5O95071 2799 aaPredicted RBP13.27□□□□□ -0.29
LIMS3-205ENST00000487150 PRORSD1PA6NEY8 169 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 ARAFP10398 606 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 PRDX6P30041 224 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 GYS2P54840 703 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 RPS3AP61247 264 aaKnown RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 CDK6Q00534 326 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 RUNDC3AQ59EK9 446 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 INTS11Q5TA45 600 aaKnown RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 SERPINA11Q86U17 422 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 MTDHQ86UE4 582 aaKnown RBP13.26□□□□□ -0.29
LIMS3-205ENST00000487150 RETREG3Q86VR2 466 aa13.26□□□□□ -0.29
LIMS3-205ENST00000487150 HIPK4Q8NE63 616 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms